Detailed information NTG0156262

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: LLUL8_RS10545
• Genome accession: NZ_CP015908
• Coordinates: 2063137..2064213 (+)
• Length: 358 a.a.
• NCBI ID: WP_010906242.1
• Uniprot ID: Q9CE70
• Organism: Lactococcus lactis subsp. lactis strain UL8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2058137..2069213

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLUL8_RS10520 (LLUL8_2050)	pgsA	2058297..2058869 (-)	573	WP_004254763.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
LLUL8_RS10525 (LLUL8_2051)	-	2058910..2059806 (-)	897	WP_004254758.1	RodZ family helix-turn-helix domain-containing protein	-
LLUL8_RS10530 (LLUL8_2052)	-	2060018..2061301 (-)	1284	WP_004254752.1	pitrilysin family protein	-
LLUL8_RS10535 (LLUL8_2053)	-	2061291..2062577 (-)	1287	WP_021214872.1	pitrilysin family protein	-
LLUL8_RS10540 (LLUL8_2054)	yaaA	2062775..2063137 (+)	363	WP_004254746.1	S4 domain-containing protein YaaA	-
LLUL8_RS10545 (LLUL8_2055)	recF	2063137..2064213 (+)	1077	WP_010906242.1	DNA replication/repair protein RecF	Machinery gene
LLUL8_RS10550 (LLUL8_2056)	-	2064300..2064668 (-)	369	WP_004254740.1	carboxymuconolactone decarboxylase family protein	-
LLUL8_RS10555 (LLUL8_2057)	-	2064746..2065123 (+)	378	WP_010906243.1	MerR family transcriptional regulator	-
LLUL8_RS10560 (LLUL8_2058)	-	2065136..2066080 (-)	945	WP_010906244.1	alpha/beta hydrolase	-
LLUL8_RS10565 (LLUL8_2059)	galE	2066203..2067183 (-)	981	WP_010906245.1	UDP-glucose 4-epimerase GalE	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 41356.23 Da
• Isoelectric Point: 6.8652

>NTDB_id=156262 LLUL8_RS10545 WP_010906242.1 2063137..2064213(+) (recF) [Lactococcus lactis subsp. lactis strain UL8]
MKLKAIELKNFRNYEELKLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKELISWSQQEMKVSGVVEKAHAT
VPLEVQLSPKGRIAKANHLKENRLADYIGQLKILMFAPENLELVKGSPATRRKFMDIELGQIHAVYLYDSMRYNRALKER
NAYLKFDKDKIDKNFLSVLDGQLAEHGNKIMLERQNFIDKLEVHAKKIHEQLTHGKENLKIIYNQNVKTDFSKELLSRQD
HDIFRHQTSVGPHRDDLQFFINEINVADFGSQGQQRTVALSIKLAEIDLIFEETGEYPILLLDDVMSELDNHRQLDLIET
SLGKTQTFITTTTLDHLKNLPENLSIFHVNAGTIEQEQ

Nucleotide

• Length: 1077 bp

>NTDB_id=156262 LLUL8_RS10545 WP_010906242.1 2063137..2064213(+) (recF) [Lactococcus lactis subsp. lactis strain UL8]
ATGAAACTCAAAGCAATTGAACTCAAAAATTTTCGTAATTATGAGGAATTAAAACTTGATTTTCACCCTAATCTCAATAT
TTTTTTAGGACAAAATGCTCAAGGGAAAACAAATATTCTTGAGGCGATTCATTTTTTAGCACTCACTCGTAGTCACAGAA
CAAGTCACGACAAAGAGCTCATTTCTTGGTCACAACAAGAAATGAAGGTCTCAGGAGTCGTTGAAAAAGCTCATGCAACT
GTTCCACTTGAAGTTCAATTAAGTCCCAAAGGGAGAATTGCTAAAGCCAATCATCTCAAAGAAAATCGCTTAGCCGACTA
CATTGGTCAACTAAAAATCTTGATGTTTGCACCTGAAAATTTGGAATTAGTCAAAGGTTCTCCAGCTACCCGCAGAAAAT
TTATGGATATTGAACTGGGACAAATCCATGCGGTTTACCTTTATGATTCCATGCGATATAATCGTGCGTTAAAAGAACGG
AATGCTTACTTAAAATTTGATAAAGACAAAATTGATAAAAATTTTTTAAGTGTTCTTGACGGACAATTAGCTGAACATGG
TAATAAAATCATGCTTGAGCGGCAAAATTTTATTGATAAACTTGAAGTTCATGCAAAAAAAATCCATGAGCAACTTACTC
ATGGTAAAGAAAATTTAAAAATCATTTATAATCAAAATGTGAAAACTGACTTTTCAAAAGAATTATTGAGCAGACAAGAC
CATGATATTTTTAGGCATCAAACATCGGTTGGCCCTCATCGTGACGATTTACAATTTTTTATCAATGAGATTAATGTTGC
TGATTTTGGTAGTCAAGGACAACAACGAACCGTTGCTCTCTCAATTAAATTAGCAGAAATTGATTTAATTTTTGAAGAGA
CTGGTGAGTATCCGATTTTACTTTTAGATGATGTCATGAGTGAATTAGACAATCATCGTCAACTTGATTTGATTGAAACA
AGTTTGGGTAAAACACAAACTTTTATAACTACAACTACTCTTGATCATCTTAAAAATTTACCTGAAAATCTGAGTATTTT
CCATGTTAATGCTGGAACCATTGAACAAGAGCAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-353)

3D structure

• AlphaFold DB: Q9CE70

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	55	100	0.553
recF	Bacillus subtilis subsp. subtilis str. 168	45.977	97.207	0.447