Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | RN80_RS00540 | Genome accession | NZ_CP012646 |
| Coordinates | 99214..100251 (-) | Length | 345 a.a. |
| NCBI ID | WP_060627157.1 | Uniprot ID | - |
| Organism | Streptococcus mitis strain KCOM 1350 (= ChDC B183) | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 94214..105251
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RN80_RS00515 (RN80_00520) | - | 94975..96306 (-) | 1332 | WP_049543730.1 | hemolysin family protein | - |
| RN80_RS00520 (RN80_00525) | endA | 96575..97399 (-) | 825 | WP_049543728.1 | DNA-entry nuclease EndA | Machinery gene |
| RN80_RS00525 (RN80_00530) | - | 97438..97626 (-) | 189 | WP_025169706.1 | DNA-directed RNA polymerase subunit beta | - |
| RN80_RS00530 (RN80_00535) | murA | 97619..98902 (-) | 1284 | WP_060627156.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| RN80_RS00535 (RN80_00540) | - | 98926..99156 (-) | 231 | WP_000250396.1 | DUF1146 family protein | - |
| RN80_RS00540 (RN80_00545) | sepM | 99214..100251 (-) | 1038 | WP_060627157.1 | SepM family pheromone-processing serine protease | Regulator |
| RN80_RS00545 (RN80_00550) | coaD | 100235..100723 (-) | 489 | WP_060627158.1 | pantetheine-phosphate adenylyltransferase | - |
| RN80_RS00550 (RN80_00555) | rsmD | 100713..101252 (-) | 540 | WP_060627159.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| RN80_RS00555 (RN80_00560) | asnA | 101317..102309 (-) | 993 | WP_060627160.1 | aspartate--ammonia ligase | - |
| RN80_RS00560 (RN80_00565) | - | 102420..103103 (-) | 684 | WP_060627161.1 | Bax inhibitor-1 family protein | - |
| RN80_RS00565 (RN80_00570) | - | 103158..103898 (-) | 741 | WP_060627162.1 | TrmH family RNA methyltransferase | - |
| RN80_RS00570 (RN80_00575) | - | 103932..104210 (+) | 279 | WP_001174612.1 | acylphosphatase | - |
| RN80_RS00575 (RN80_00580) | yidC | 104288..105214 (+) | 927 | WP_060627163.1 | membrane protein insertase YidC | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 37650.73 Da Isoelectric Point: 4.8803
>NTDB_id=155970 RN80_RS00540 WP_060627157.1 99214..100251(-) (sepM) [Streptococcus mitis strain KCOM 1350 (= ChDC B183)]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDKEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYLGVYVLTVTDNSTFKGILNISDTVIAVNDQTF
DSSKDLIDYVNSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVTSDVPIRFSTAGIGGPSAGLMFSL
AIYTQIADPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASAREGAAIFFAPDNPVSEEEQKEHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDKEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYLGVYVLTVTDNSTFKGILNISDTVIAVNDQTF
DSSKDLIDYVNSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVTSDVPIRFSTAGIGGPSAGLMFSL
AIYTQIADPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASAREGAAIFFAPDNPVSEEEQKEHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP
Nucleotide
Download Length: 1038 bp
>NTDB_id=155970 RN80_RS00540 WP_060627157.1 99214..100251(-) (sepM) [Streptococcus mitis strain KCOM 1350 (= ChDC B183)]
ATGAAAAAAAAGATTAGATGGCCCTTATATGTCATTGCGGCCTTAATTGTGACTTTCTTGGCATTTGTAGTGCCCTTGCC
CTACTATATAGAAGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTCAATGACAAAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTCCAGCACGCTACTTTAGCCCATATGATTTATGCTTGGTTGACGCCTTTTACA
GATATTCGTAGTGCCCAAGAGACTACAGGTGGTTCTTCCGATGTTGAATTTATGCGGATTAATCAATTCTACATGCAGAC
ATCGCAAAATATGGCCAAGTATCAAGGGCTAAAAACAGCTGGTAAGGATATTGAACTTAAATACCTTGGGGTTTATGTTT
TGACTGTGACGGATAATTCGACCTTTAAAGGGATTCTCAACATCTCTGATACGGTCATAGCAGTCAATGATCAGACCTTC
GACAGTTCCAAAGATTTGATTGATTACGTTAATTCTCAAAAATTAGGGGACTCAGTTAAAGTGACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGAAAAATCATTACTTTAGAAAATGGCAAAAATGGAATTGGAATCGGCTTGATTGACCGTA
CGGAAGTGACCAGTGATGTCCCAATTCGCTTTTCAACAGCTGGTATTGGCGGTCCAAGTGCAGGTCTCATGTTTAGTCTG
GCCATCTATACCCAAATAGCTGACCCTGGCCTTCGTAATGGCCGTATTGTTGCTGGTACAGGTACCATTGACCGTGATGG
TAATGTGGGGGACATTGGAGGTATTGATAAGAAAGTTGTAGCTTCGGCTAGAGAAGGTGCTGCTATTTTCTTTGCCCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAAGAGCATCCTGATGCGAAAAATAACTACCAAACAGCTCTGGAAGCAGCCAAA
ACAATTAAGACAGATATGAAAATTGTGCCAGTTAAAACCCTACAAGATGCAATTGATTACTTGAAAAACAATCCCTAA
ATGAAAAAAAAGATTAGATGGCCCTTATATGTCATTGCGGCCTTAATTGTGACTTTCTTGGCATTTGTAGTGCCCTTGCC
CTACTATATAGAAGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTCAATGACAAAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTCCAGCACGCTACTTTAGCCCATATGATTTATGCTTGGTTGACGCCTTTTACA
GATATTCGTAGTGCCCAAGAGACTACAGGTGGTTCTTCCGATGTTGAATTTATGCGGATTAATCAATTCTACATGCAGAC
ATCGCAAAATATGGCCAAGTATCAAGGGCTAAAAACAGCTGGTAAGGATATTGAACTTAAATACCTTGGGGTTTATGTTT
TGACTGTGACGGATAATTCGACCTTTAAAGGGATTCTCAACATCTCTGATACGGTCATAGCAGTCAATGATCAGACCTTC
GACAGTTCCAAAGATTTGATTGATTACGTTAATTCTCAAAAATTAGGGGACTCAGTTAAAGTGACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGAAAAATCATTACTTTAGAAAATGGCAAAAATGGAATTGGAATCGGCTTGATTGACCGTA
CGGAAGTGACCAGTGATGTCCCAATTCGCTTTTCAACAGCTGGTATTGGCGGTCCAAGTGCAGGTCTCATGTTTAGTCTG
GCCATCTATACCCAAATAGCTGACCCTGGCCTTCGTAATGGCCGTATTGTTGCTGGTACAGGTACCATTGACCGTGATGG
TAATGTGGGGGACATTGGAGGTATTGATAAGAAAGTTGTAGCTTCGGCTAGAGAAGGTGCTGCTATTTTCTTTGCCCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAAGAGCATCCTGATGCGAAAAATAACTACCAAACAGCTCTGGAAGCAGCCAAA
ACAATTAAGACAGATATGAAAATTGTGCCAGTTAAAACCCTACAAGATGCAATTGATTACTTGAAAAACAATCCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
59.649 |
99.13 |
0.591 |