Detailed information NTG0155872

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: LLUC08_RS05785
• Genome accession: NZ_CP015903
• Coordinates: 1178636..1179706 (-)
• Length: 356 a.a.
• NCBI ID: WP_003131037.1
• Uniprot ID: Q9CG78
• Organism: Lactococcus lactis subsp. lactis strain UC08
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1173636..1184706

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLUC08_RS05770 (LLUC08_1116)	dprA	1173934..1174782 (+)	849	WP_012897825.1	DNA-processing protein DprA	Machinery gene
LLUC08_RS05775 (LLUC08_1117)	topA	1175044..1177176 (+)	2133	WP_023189256.1	type I DNA topoisomerase	-
LLUC08_RS05780 (LLUC08_1118)	trmFO	1177248..1178591 (+)	1344	WP_025017071.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
LLUC08_RS05785 (LLUC08_1119)	xerS	1178636..1179706 (-)	1071	WP_003131037.1	tyrosine recombinase XerS	Machinery gene
LLUC08_RS05790 (LLUC08_1120)	-	1180189..1180476 (-)	288	WP_081199598.1	hypothetical protein	-
LLUC08_RS05795 (LLUC08_1121)	xerS	1180560..1181615 (-)	1056	WP_081199600.1	tyrosine recombinase XerS	Machinery gene
LLUC08_RS05800 (LLUC08_02605)	-	1182105..1182329 (+)	225	WP_128192780.1	hypothetical protein	-
LLUC08_RS05805 (LLUC08_1122)	-	1182331..1182528 (-)	198	WP_237025787.1	hypothetical protein	-
LLUC08_RS05810 (LLUC08_1123)	arsB	1182537..1183574 (-)	1038	WP_081199602.1	ACR3 family arsenite efflux transporter	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41397.21 Da
• Isoelectric Point: 9.6568

>NTDB_id=155872 LLUC08_RS05785 WP_003131037.1 1178636..1179706(-) (xerS) [Lactococcus lactis subsp. lactis strain UC08]
MKREQLIQNIEKLKHIMPSYVLEYYQSKLTIPYSLNTLYEYLKEYERFFSWLVDSGVADVDKITDVSLSVLENLTKRDLE
SFILYLRERPRLNTRSTRYGVSQTTINRTLSALSSLYKYLTEEVENEDGEPYFYRNVMKKVQTKKKSETLASRAENIKGK
LFLGDETQGFLDYIDNEYEKTLSNRARSSFFKNKERDLAIIALILASGIRLSEAVNVDLRDLNLITMVVEVTRKGGKRDA
VPYAPFAKTYFERYLEVRSQRYKTTAKDTAFFVTLYRDVPSRIDPSSVEKLVAKYSQAFKVRVTPHKLRHTLATRLYAQT
NSQVLVSNQLGHASTQVTDLYTHIINEEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=155872 LLUC08_RS05785 WP_003131037.1 1178636..1179706(-) (xerS) [Lactococcus lactis subsp. lactis strain UC08]
ATGAAACGTGAACAATTAATACAAAATATTGAAAAACTAAAACATATCATGCCTTCTTATGTTTTAGAATATTATCAATC
TAAACTTACTATTCCTTATAGTTTGAATACACTTTATGAATATCTTAAAGAATATGAACGTTTCTTTAGTTGGTTGGTCG
ATTCTGGAGTTGCTGATGTTGATAAGATAACTGATGTTTCCCTCTCTGTTTTAGAAAACTTAACTAAACGAGATTTGGAG
TCATTTATCCTCTATCTTAGGGAGAGACCCCGTTTAAATACGCGCTCTACTCGTTATGGGGTAAGTCAAACAACAATTAA
TCGTACTCTATCTGCTCTTTCTAGTCTTTATAAATACCTTACTGAAGAGGTTGAAAATGAAGATGGTGAGCCTTACTTCT
ATCGTAATGTTATGAAGAAGGTACAGACTAAGAAAAAATCCGAAACTTTAGCTTCTCGTGCTGAGAATATTAAAGGGAAG
CTTTTTTTGGGAGATGAAACTCAAGGTTTTCTTGACTATATTGATAATGAATATGAAAAAACATTATCAAATAGAGCTCG
TTCTAGTTTTTTCAAAAATAAAGAACGTGATTTAGCAATTATTGCACTTATTTTAGCCTCTGGTATTCGTCTTTCTGAGG
CAGTTAATGTAGATTTAAGGGATTTAAATCTTATTACTATGGTTGTTGAGGTGACTCGTAAAGGAGGAAAAAGGGATGCT
GTTCCTTATGCTCCTTTTGCCAAAACTTATTTTGAAAGATACTTGGAAGTACGAAGTCAACGTTATAAGACTACAGCGAA
AGATACGGCATTTTTTGTGACACTTTATAGAGATGTTCCTAGCCGAATAGATCCTTCTAGTGTTGAAAAATTAGTTGCTA
AATATTCTCAAGCTTTTAAAGTGCGAGTGACCCCTCACAAGCTTAGACATACACTTGCGACTCGACTTTATGCTCAAACA
AATTCTCAGGTATTGGTGAGTAATCAGTTAGGGCACGCTTCAACTCAAGTTACAGACCTTTATACTCATATTATCAATGA
AGAGCAAAAAAATGCTTTAGATAATCTATAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (182-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: Q9CG78

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	76.685	100	0.767