Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   AMQ28_RS10440 Genome accession   NZ_CP012608
Coordinates   2187012..2187890 (+) Length   292 a.a.
NCBI ID   WP_053579541.1    Uniprot ID   A0A0M4GSQ6
Organism   Acinetobacter sp. TTH0-4     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2182012..2192890
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AMQ28_RS10410 (AMQ28_10415) wrbA 2182770..2183366 (+) 597 WP_053579536.1 NAD(P)H:quinone oxidoreductase -
  AMQ28_RS10415 (AMQ28_10420) - 2183414..2183800 (-) 387 WP_053579537.1 hypothetical protein -
  AMQ28_RS10420 (AMQ28_10425) - 2184013..2184375 (-) 363 WP_212772141.1 VOC family protein -
  AMQ28_RS10425 (AMQ28_10430) - 2184551..2185126 (-) 576 WP_053579538.1 xanthine phosphoribosyltransferase -
  AMQ28_RS10430 (AMQ28_10435) - 2185217..2185930 (-) 714 WP_053579539.1 DUF3108 domain-containing protein -
  AMQ28_RS10435 (AMQ28_10440) - 2186086..2186775 (-) 690 WP_053579540.1 hypothetical protein -
  AMQ28_RS10440 (AMQ28_10445) tonB2 2187012..2187890 (+) 879 WP_053579541.1 energy transducer TonB Machinery gene
  AMQ28_RS10445 (AMQ28_10450) - 2187939..2188337 (-) 399 WP_053579542.1 hypothetical protein -
  AMQ28_RS10450 (AMQ28_10455) ybeY 2188438..2188917 (-) 480 WP_053579543.1 rRNA maturation RNase YbeY -
  AMQ28_RS10455 (AMQ28_10460) - 2188926..2190032 (-) 1107 WP_053579544.1 PhoH family protein -
  AMQ28_RS10460 (AMQ28_10465) miaB 2190070..2191524 (-) 1455 WP_053579545.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 292 a.a.        Molecular weight: 33254.98 Da        Isoelectric Point: 9.4753

>NTDB_id=155772 AMQ28_RS10440 WP_053579541.1 2187012..2187890(+) (tonB2) [Acinetobacter sp. TTH0-4]
MLKKISFAPFMHAWWKDPVFSSAVILAVVLHLIVLTLQFAMPQESDAAVKEIAVTLRPSKDQIKNADFLAQADQQGSGTF
REAHRMSSDMPAAEIEQTTGEQEQETLERLQQKSELSFEEKVLMTTLSWKKEAEQNQRKKAMQALNSQFQAKAAMVASLE
AQYLQRQQNFSRQQKIKTVDGIQAKRDISAAYLEKFRQKVEFYGNRYYPDTAKEQRLAGEVRLMVILNKNGGIRALRLIE
SSGHPVLDDAAKTSVRKAAPFGGFDQNMKDISELRVVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 879 bp        

>NTDB_id=155772 AMQ28_RS10440 WP_053579541.1 2187012..2187890(+) (tonB2) [Acinetobacter sp. TTH0-4]
ATGCTTAAAAAAATTAGTTTTGCACCTTTTATGCATGCATGGTGGAAAGACCCTGTTTTTAGCAGTGCCGTTATTTTGGC
TGTAGTTCTGCATTTGATTGTTTTAACCTTGCAGTTTGCAATGCCACAAGAAAGCGATGCAGCAGTCAAAGAAATTGCAG
TAACTTTACGCCCAAGTAAAGATCAAATTAAAAATGCAGATTTTTTGGCACAGGCCGATCAGCAGGGTTCAGGCACATTT
CGTGAGGCACATCGTATGTCAAGTGATATGCCTGCTGCTGAAATTGAACAGACTACGGGTGAGCAAGAACAAGAAACTTT
AGAGCGTTTACAACAAAAAAGTGAACTAAGCTTCGAGGAAAAGGTTTTAATGACCACCCTCAGTTGGAAAAAAGAAGCGG
AACAAAATCAACGTAAAAAGGCCATGCAAGCGTTAAATAGCCAGTTTCAGGCCAAAGCTGCAATGGTCGCCAGTCTTGAA
GCACAATATTTACAACGTCAGCAAAACTTTAGCCGTCAGCAAAAAATTAAAACAGTCGATGGCATTCAAGCTAAACGAGA
TATTTCTGCAGCATATTTAGAAAAATTTCGGCAGAAAGTGGAGTTCTACGGCAACCGCTATTATCCTGATACTGCAAAAG
AGCAACGTTTAGCTGGTGAAGTTCGTTTAATGGTGATCTTAAATAAAAATGGCGGTATTCGCGCACTGCGTTTAATTGAA
AGTTCAGGGCATCCAGTTTTAGATGACGCTGCTAAAACTTCGGTGCGCAAGGCTGCGCCATTTGGTGGTTTTGATCAAAA
TATGAAGGATATTTCAGAGCTTCGGGTTGTACGAACCTGGCGTTTCGATCCTGCTGAAGCTGAATTTGAAGTGCATTGA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(205-282)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0M4GSQ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

71.864

100

0.726

Multiple sequence alignment