Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   LLUC06_RS02625 Genome accession   NZ_CP015902
Coordinates   508458..509240 (+) Length   260 a.a.
NCBI ID   WP_023188991.1    Uniprot ID   -
Organism   Lactococcus lactis subsp. lactis strain UC06     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 503458..514240
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLUC06_RS02600 (LLUC06_0505) vicX 503484..504296 (-) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator
  LLUC06_RS02605 (LLUC06_0506) vicK 504465..505907 (-) 1443 WP_012897229.1 cell wall metabolism sensor histidine kinase WalK Regulator
  LLUC06_RS02610 (LLUC06_0507) yycF 505900..506601 (-) 702 WP_003131580.1 response regulator YycF -
  LLUC06_RS02615 (LLUC06_0508) tmk 506779..507414 (+) 636 WP_012897230.1 dTMP kinase -
  LLUC06_RS02620 (LLUC06_0509) - 507546..508406 (+) 861 WP_003131573.1 DNA polymerase III subunit delta' -
  LLUC06_RS02625 (LLUC06_0510) yaaT 508458..509240 (+) 783 WP_023188991.1 stage 0 sporulation family protein Regulator
  LLUC06_RS02630 (LLUC06_0511) yabA 509233..509559 (+) 327 WP_011675472.1 DNA replication initiation control protein YabA -
  LLUC06_RS02635 (LLUC06_0512) rsmI 509559..510434 (+) 876 WP_003131568.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  LLUC06_RS02640 (LLUC06_0513) - 510511..510702 (-) 192 WP_012897234.1 hypothetical protein -
  LLUC06_RS02645 (LLUC06_0514) mvk 510765..511697 (-) 933 WP_003131564.1 mevalonate kinase -
  LLUC06_RS02650 (LLUC06_0515) mvaD 512002..512958 (+) 957 WP_023188990.1 diphosphomevalonate decarboxylase -
  LLUC06_RS02655 (LLUC06_0516) - 512945..513934 (+) 990 WP_012897236.1 mevalonate kinase -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29817.30 Da        Isoelectric Point: 6.0566

>NTDB_id=155754 LLUC06_RS02625 WP_023188991.1 508458..509240(+) (yaaT) [Lactococcus lactis subsp. lactis strain UC06]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLIIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=155754 LLUC06_RS02625 WP_023188991.1 508458..509240(+) (yaaT) [Lactococcus lactis subsp. lactis strain UC06]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCTAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTATCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCATGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

45.662

84.231

0.385

Multiple sequence alignment