Detailed information NTG0155755

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: AMQ28_RS06795
• Genome accession: NZ_CP012608
• Coordinates: 1441834..1443246 (+)
• Length: 470 a.a.
• NCBI ID: WP_171250361.1
• Uniprot ID: -
• Organism: Acinetobacter sp. TTH0-4
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 1436834..1448246

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AMQ28_RS06775 (AMQ28_06780)	thrC	1437075..1438220 (+)	1146	WP_053578963.1	threonine synthase	-
AMQ28_RS06780 (AMQ28_06785)	-	1438295..1439347 (-)	1053	WP_053578964.1	serine hydrolase	-
AMQ28_RS06785 (AMQ28_06790)	-	1439566..1440201 (+)	636	WP_053578965.1	response regulator	-
AMQ28_RS06790 (AMQ28_06795)	pilS	1440236..1441813 (+)	1578	WP_053578966.1	sensor histidine kinase	Regulator
AMQ28_RS06795 (AMQ28_06800)	pilR	1441834..1443246 (+)	1413	WP_171250361.1	sigma-54-dependent transcriptional regulator	Regulator
AMQ28_RS06800 (AMQ28_06805)	-	1443255..1444382 (-)	1128	WP_416202178.1	S41 family peptidase	-
AMQ28_RS06805 (AMQ28_06810)	gpmI	1444472..1446019 (-)	1548	WP_053578969.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
AMQ28_RS06810 (AMQ28_06815)	lptG	1446135..1447205 (-)	1071	WP_053578970.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 470 a.a.
• Molecular weight: 53402.72 Da
• Isoelectric Point: 6.6703

>NTDB_id=155755 AMQ28_RS06795 WP_171250361.1 1441834..1443246(+) (pilR) [Acinetobacter sp. TTH0-4]
MVERQPLVLIVDDEEDLCTLMQMTLSRMGIKTHIAYRLEQAKKLLCEHEYDACITDLNLPDGNGIQLVEWITQKMPSLPV
AVLTAYGNMDIAIAALKAGAFDFVSKPINQKHLEQLLQKAFNKPIEHLQTKQDSLEQRLLIGQSFPIQQLRITLNKIARS
QAPVFITGESGTGKEVIANLVHRLSNRNEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLIQSAHGGSLFLDE
IAELPLNMQVKLLRAVQEKRIRPVGSEHEIDVDFRVISASHQDLEALVQQGKFRHDLFFRIHVMDLVLPPLRERGDDIIL
LAHHFIQKISQEWGIPAKQLTERAKKFLLEQYYPGNVRELRNIIERAITLSDDEKIDLSHLQSAPLRYPRMNPVDLQESI
VLPRTESTLSGKKLPEEGLELYLENIEKDILLNALNLTHWNRTVAAKKLGMSFRSLRYRLKKFGLDTEDE

Nucleotide

• Length: 1413 bp

>NTDB_id=155755 AMQ28_RS06795 WP_171250361.1 1441834..1443246(+) (pilR) [Acinetobacter sp. TTH0-4]
ATTGTGGAACGACAACCACTTGTTTTAATCGTGGATGATGAAGAAGATTTATGTACACTGATGCAAATGACTTTATCACG
GATGGGCATCAAAACGCATATTGCATATCGCCTTGAACAAGCAAAAAAGCTGTTATGCGAACATGAATACGATGCATGTA
TAACCGATTTAAACTTGCCCGATGGCAATGGCATTCAACTGGTCGAGTGGATTACGCAAAAAATGCCCTCATTGCCTGTT
GCAGTCCTGACCGCCTATGGCAACATGGATATCGCAATTGCTGCATTAAAAGCAGGTGCTTTTGATTTTGTCAGTAAACC
TATTAATCAAAAACATTTAGAACAACTTTTACAAAAAGCATTTAACAAACCCATCGAACACCTTCAAACCAAACAAGACA
GTTTAGAACAACGATTGCTAATTGGACAATCTTTTCCTATTCAACAATTAAGAATCACTTTAAATAAAATAGCTCGTTCT
CAAGCACCTGTCTTTATTACTGGTGAATCAGGAACAGGAAAAGAAGTGATTGCTAATCTGGTGCATCGCCTCAGCAATCG
TAATGAAGGCCCTTTTATTGCCATCAATTGTGGTGCGATTCCTACAGAACTCATGGAAAGTGAGCTTTTTGGACACAAAA
AAGGGAGTTTCACGGGTGCAACACAAGACAAACAAGGTCTGATTCAGTCGGCACATGGCGGCAGCCTATTTTTAGATGAG
ATTGCAGAGTTGCCGCTGAACATGCAGGTCAAACTACTGCGTGCGGTGCAGGAAAAGCGCATACGTCCAGTGGGTTCAGA
ACATGAAATTGATGTTGATTTTCGCGTGATTAGCGCCAGTCATCAGGATTTAGAAGCTTTGGTACAGCAAGGCAAGTTTC
GACATGATTTGTTTTTCCGTATTCATGTGATGGATTTAGTCCTTCCTCCTCTACGTGAGCGTGGCGATGATATTATTTTA
CTCGCGCATCATTTTATTCAAAAAATTAGTCAGGAATGGGGAATTCCTGCCAAACAGCTCACTGAACGCGCAAAGAAATT
TTTACTAGAGCAATATTATCCAGGAAATGTCAGAGAGTTACGCAATATCATTGAACGGGCAATCACTTTAAGTGATGATG
AAAAAATTGATTTATCTCACTTACAAAGTGCACCTTTACGTTATCCAAGAATGAATCCAGTCGATCTACAAGAATCTATT
GTTCTACCTCGTACTGAAAGCACACTTTCTGGTAAAAAGCTGCCTGAAGAAGGTTTAGAGCTTTATTTAGAAAATATTGA
AAAAGATATTTTACTCAATGCCTTGAACTTAACGCACTGGAACAGAACCGTGGCCGCGAAGAAACTGGGGATGTCCTTTC
GCTCGTTACGATATCGTTTAAAAAAATTCGGACTTGATACAGAAGACGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-117)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

• Bacterial regulatory protein, Fis family (HTH_8) (423-463)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	76.05	100	0.77
pilR	Pseudomonas aeruginosa PAK	49.455	97.66	0.483