Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   A8713_RS17600 Genome accession   NZ_CP015849
Coordinates   4083687..4084811 (-) Length   374 a.a.
NCBI ID   WP_026252689.1    Uniprot ID   A0ABV8TH87
Organism   Streptomyces sp. SAT1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4078687..4089811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A8713_RS17575 (A8713_17565) cseB 4078959..4079660 (-) 702 WP_064534432.1 two-component system response regulator CseB -
  A8713_RS17580 (A8713_17570) - 4079965..4080597 (-) 633 WP_064534433.1 hypothetical protein -
  A8713_RS17585 (A8713_17575) - 4080654..4081193 (-) 540 WP_018568846.1 SigE family RNA polymerase sigma factor -
  A8713_RS17590 (A8713_17580) - 4081564..4082619 (-) 1056 WP_064534434.1 A/G-specific adenine glycosylase -
  A8713_RS17595 (A8713_17585) - 4082822..4083640 (+) 819 WP_079159025.1 hypothetical protein -
  A8713_RS17600 (A8713_17590) disA 4083687..4084811 (-) 1125 WP_026252689.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  A8713_RS17605 (A8713_17595) radA/sms 4084904..4086313 (-) 1410 WP_064534435.1 DNA repair protein RadA Machinery gene
  A8713_RS17610 (A8713_17600) - 4086511..4088256 (+) 1746 WP_064534436.1 hypothetical protein -
  A8713_RS17615 (A8713_17605) - 4088380..4089177 (-) 798 WP_064534437.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40075.82 Da        Isoelectric Point: 5.0092

>NTDB_id=155287 A8713_RS17600 WP_026252689.1 4083687..4084811(-) (disA) [Streptomyces sp. SAT1]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERVLRGNTGGLIVLGSDKTVETMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVEEALAELDKLSHAELLEMSTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=155287 A8713_RS17600 WP_026252689.1 4083687..4084811(-) (disA) [Streptomyces sp. SAT1]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGCGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCCGGCACGGCGCTGCGGGACGGACTCGAGCGGGTCCTGCGCGGCAACACCGGCGGTCTGATCGTGC
TCGGCTCCGACAAGACCGTGGAGACGATGTGCACGGGCGGTTTCGTGCTGGACGTCGAGTTCACGGCGACCCGGCTGCGG
GAGCTGTGCAAGCTGGACGGCGGCATCGTGCTGTCCTCGGACCTGTCGAAGATCCTGCGGGCGGGCGTGCAGCTCGTCCC
GGACCCGACGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCGG
TGGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCCCTGTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTCTCCCGCGCCAACCAGGCCCTGGCCACGCTGGAGCGCTACAAGCTGCGCCTGGACGAGGTCGCGGGCACCCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACGGTCCGGGACGTCTCCGCGGTCGCGCAGCGCCTGGAGATGGTCCGCCGCATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGACTGCTGGCGCTCCAGCTCGACGAGCTGATCGCG
GGCGTGGAGCCCGAGCGCGAGCTGGTCGTCCGGGACTATGTGCCCGAGCCCACGGCCAAGCGCTCCCGTACGGTCGAGGA
GGCCCTCGCCGAGCTGGACAAGCTCTCGCACGCGGAGCTGCTGGAGATGTCCACCGTCGCCCGCGCCCTCGGCTACACCG
GTTCGCCCGAGACCCTGGACTCGGCGGTCTCCCCGCGCGGCTTCCGGCTGCTGGCCAAGGTCCCCCGGCTGCCCGGCGCC
ATCATCGACCGCCTGGTCGAGCACTTCGGCGGCCTCCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTCCAGACGGTGGA
CGGCGTGGGCGAGGCCCGCGCCCGCAGCGTCCGCGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.26

96.524

0.447


Multiple sequence alignment