Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | A7B19_RS21535 | Genome accession | NZ_CP015726 |
| Coordinates | 5247422..5249944 (-) | Length | 840 a.a. |
| NCBI ID | WP_009716899.1 | Uniprot ID | D9WD33 |
| Organism | Streptomyces sp. RTd22 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 5242422..5254944
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7B19_RS21520 | mshD | 5242665..5243597 (-) | 933 | WP_063729906.1 | mycothiol synthase | - |
| A7B19_RS21525 | - | 5243775..5245598 (+) | 1824 | WP_063729909.1 | bifunctional metallophosphatase/5'-nucleotidase | - |
| A7B19_RS21530 | - | 5245660..5246835 (-) | 1176 | WP_063729913.1 | macrolide family glycosyltransferase | - |
| A7B19_RS21535 | clpC | 5247422..5249944 (-) | 2523 | WP_009716899.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| A7B19_RS21540 | - | 5250407..5251048 (+) | 642 | WP_063729918.1 | SCO3374 family protein | - |
| A7B19_RS21545 | - | 5251054..5251389 (-) | 336 | WP_009716898.1 | histone-like nucleoid-structuring protein Lsr2 | - |
| A7B19_RS21550 | - | 5251611..5252132 (-) | 522 | WP_009716897.1 | amino-acid N-acetyltransferase | - |
| A7B19_RS21555 | - | 5252155..5252550 (-) | 396 | WP_009716896.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| A7B19_RS21560 | - | 5252665..5252859 (-) | 195 | WP_009716895.1 | hypothetical protein | - |
| A7B19_RS21565 | - | 5252895..5253739 (-) | 845 | Protein_4473 | hypothetical protein | - |
Sequence
Protein
Download Length: 840 a.a. Molecular weight: 93098.40 Da Isoelectric Point: 5.7519
>NTDB_id=154615 A7B19_RS21535 WP_009716899.1 5247422..5249944(-) (clpC) [Streptomyces sp. RTd22]
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKEAATAGGPAEGT
PSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKD
KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT
LDEYRKYLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDSALVAAATLADRYISDRFLPDKAIDLID
EAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQDFEMAAGLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDEELI
AEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK
TLAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILED
GRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDVKTGYERMKNKVNEELKQHFRPEFLNRVDDTVVFHQLT
EEDIIQIVDLMITKVDERLKDRDMGIELSGVAKKLLAKRGYDPVLGARPLRRTIQREIEDVLSEKILFGELRPGHIVVVD
TEGEGEEKKFTFRGEEKSALPDTPPIESAAGGGPNLSKDA
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKEAATAGGPAEGT
PSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKD
KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT
LDEYRKYLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDSALVAAATLADRYISDRFLPDKAIDLID
EAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQDFEMAAGLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDEELI
AEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK
TLAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILED
GRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDVKTGYERMKNKVNEELKQHFRPEFLNRVDDTVVFHQLT
EEDIIQIVDLMITKVDERLKDRDMGIELSGVAKKLLAKRGYDPVLGARPLRRTIQREIEDVLSEKILFGELRPGHIVVVD
TEGEGEEKKFTFRGEEKSALPDTPPIESAAGGGPNLSKDA
Nucleotide
Download Length: 2523 bp
>NTDB_id=154615 A7B19_RS21535 WP_009716899.1 5247422..5249944(-) (clpC) [Streptomyces sp. RTd22]
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAACACATTCTCCTGGGCCTGATCCACGAGGGTGAGGGTGTCGCCGCTAAGGCCCTGGAGAGCCTCGGGA
TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGTCAGGGCCAGCAGGCCCCGTCCGGGCACATCCCCTTC
ACCCCCCGTGCCAAGAAGGTCCTGGAGCTGTCGCTCCGCGAGGCCCTTCAGCTCGGCCACAACTACATCGGCACGGAGCA
CATCCTGCTCGGCCTGATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTCGTGAAGCTGGGCGCCGATCTGAACCGGG
TGCGGCAGCAGGTCATCCAGCTGCTCTCCGGCTACCAGGGCAAGGAGGCCGCCACCGCCGGCGGCCCGGCGGAGGGCACT
CCCTCCACCTCGCTCGTCCTGGACCAGTTCGGCCGCAACCTCACCCAGGCCGCCCGCGAATCCAAGCTCGACCCGGTCAT
CGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTTTCGCGCCGCACCAAGAACAACCCGGTCCTCATCGGCGAGC
CCGGCGTCGGTAAGACGGCGGTCGTCGAGGGCCTGGCCCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAGGAC
AAGCACCTCTACACCCTGGACCTGGGTGCCCTGGTCGCCGGCTCCCGCTACCGCGGTGATTTCGAGGAGCGCCTGAAGAA
GGTCCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTCCACACCCTGGTGGGTGCGGGTGCCG
CCGAGGGCGCGATCGATGCCGCGAGCATCCTCAAGCCGATGCTGGCGCGGGGCGAGCTCCAGACCATCGGTGCGACGACG
CTCGACGAGTACCGGAAGTACCTGGAGAAGGACGCGGCCCTGGAGCGCCGCTTCCAGCCCATCCAGGTCGCCGAGCCGTC
GCTGCCGCACACCATCGAGATCCTCAAGGGCCTGCGGGACCGCTACGAGGCGCACCACCGCGTCTCGATCACGGACTCGG
CCCTGGTCGCGGCCGCCACCCTGGCCGACCGCTACATCTCGGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATCGAC
GAGGCCGGTTCCCGGATGCGGATCCGCCGGATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGAGAAGATCGCCGACGT
GCGCCGGGAGAAGGAGTCCGCGATCGACTCGCAGGACTTCGAGATGGCCGCGGGCCTGCGCGACAAGGAGAAGCAGCTCC
TGGCCGCGAAGGCGAAGCGGGAGAAGGAGTGGAAGGCCGGCGACATGGATGTCGTCGCCGAGGTCGACGAGGAGCTGATC
GCCGAGGTCCTGGCCACGGCCACCGGCATCCCGGTCTTCAAGCTCACCGAGGAGGAGTCCTCCCGGCTGCTGCGCATGGA
GGACGAGCTCCACAAGCGCGTCATCGGCCAGAAGGACGCCATCAAGGCGCTCTCGCAGGCCATCCGGCGTACGCGTGCGG
GCCTCAAGGACCCCAAGCGCCCCGGCGGCTCCTTCATCTTCGCGGGCCCGTCCGGTGTCGGTAAGACCGAGCTGAGCAAG
ACTCTCGCCGAGTTCCTCTTCGGCGACGAGGACGCGATGATCTCGCTCGACATGTCGGAGTTCAGCGAGAAGCACACCGT
CTCGCGGCTCTTCGGCTCCCCGCCCGGATACGTGGGCTACGAGGAGGGCGGCCAGCTCACCGAGAAGGTGCGCCGCAAGC
CGTTCTCCGTGGTCCTCTTCGACGAGGTCGAGAAGGCCCACCCGGACATCTTCAACTCGCTGCTCCAGATCCTGGAGGAC
GGTCGGCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTGATCATCATGACCACCAACCTCGGCACCCG
GGACATCTCCAAGGGCTTCAACCTGGGCTTCGCCGCCCAGGGCGATGTGAAGACCGGCTACGAGCGGATGAAGAACAAGG
TCAACGAGGAGCTGAAGCAGCACTTCCGGCCCGAGTTCCTCAACCGTGTCGACGACACGGTCGTCTTCCACCAGCTCACC
GAGGAAGACATCATCCAGATCGTCGACCTCATGATCACCAAGGTGGACGAGCGGCTCAAGGACCGCGACATGGGCATCGA
GCTCAGTGGCGTCGCCAAGAAGCTGCTCGCCAAGCGGGGCTATGACCCCGTGCTGGGTGCCCGGCCGCTGCGCCGGACCA
TTCAGCGGGAAATCGAGGACGTGCTGTCGGAGAAGATTCTCTTCGGCGAGCTGCGTCCGGGCCACATCGTGGTCGTGGAC
ACCGAGGGCGAGGGTGAGGAGAAGAAGTTCACCTTCCGCGGCGAGGAGAAGTCGGCGCTGCCGGACACCCCGCCGATCGA
GTCCGCCGCCGGTGGAGGCCCGAACCTGAGCAAGGACGCATAA
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAACACATTCTCCTGGGCCTGATCCACGAGGGTGAGGGTGTCGCCGCTAAGGCCCTGGAGAGCCTCGGGA
TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGTCAGGGCCAGCAGGCCCCGTCCGGGCACATCCCCTTC
ACCCCCCGTGCCAAGAAGGTCCTGGAGCTGTCGCTCCGCGAGGCCCTTCAGCTCGGCCACAACTACATCGGCACGGAGCA
CATCCTGCTCGGCCTGATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTCGTGAAGCTGGGCGCCGATCTGAACCGGG
TGCGGCAGCAGGTCATCCAGCTGCTCTCCGGCTACCAGGGCAAGGAGGCCGCCACCGCCGGCGGCCCGGCGGAGGGCACT
CCCTCCACCTCGCTCGTCCTGGACCAGTTCGGCCGCAACCTCACCCAGGCCGCCCGCGAATCCAAGCTCGACCCGGTCAT
CGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTTTCGCGCCGCACCAAGAACAACCCGGTCCTCATCGGCGAGC
CCGGCGTCGGTAAGACGGCGGTCGTCGAGGGCCTGGCCCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAGGAC
AAGCACCTCTACACCCTGGACCTGGGTGCCCTGGTCGCCGGCTCCCGCTACCGCGGTGATTTCGAGGAGCGCCTGAAGAA
GGTCCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTCCACACCCTGGTGGGTGCGGGTGCCG
CCGAGGGCGCGATCGATGCCGCGAGCATCCTCAAGCCGATGCTGGCGCGGGGCGAGCTCCAGACCATCGGTGCGACGACG
CTCGACGAGTACCGGAAGTACCTGGAGAAGGACGCGGCCCTGGAGCGCCGCTTCCAGCCCATCCAGGTCGCCGAGCCGTC
GCTGCCGCACACCATCGAGATCCTCAAGGGCCTGCGGGACCGCTACGAGGCGCACCACCGCGTCTCGATCACGGACTCGG
CCCTGGTCGCGGCCGCCACCCTGGCCGACCGCTACATCTCGGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATCGAC
GAGGCCGGTTCCCGGATGCGGATCCGCCGGATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGAGAAGATCGCCGACGT
GCGCCGGGAGAAGGAGTCCGCGATCGACTCGCAGGACTTCGAGATGGCCGCGGGCCTGCGCGACAAGGAGAAGCAGCTCC
TGGCCGCGAAGGCGAAGCGGGAGAAGGAGTGGAAGGCCGGCGACATGGATGTCGTCGCCGAGGTCGACGAGGAGCTGATC
GCCGAGGTCCTGGCCACGGCCACCGGCATCCCGGTCTTCAAGCTCACCGAGGAGGAGTCCTCCCGGCTGCTGCGCATGGA
GGACGAGCTCCACAAGCGCGTCATCGGCCAGAAGGACGCCATCAAGGCGCTCTCGCAGGCCATCCGGCGTACGCGTGCGG
GCCTCAAGGACCCCAAGCGCCCCGGCGGCTCCTTCATCTTCGCGGGCCCGTCCGGTGTCGGTAAGACCGAGCTGAGCAAG
ACTCTCGCCGAGTTCCTCTTCGGCGACGAGGACGCGATGATCTCGCTCGACATGTCGGAGTTCAGCGAGAAGCACACCGT
CTCGCGGCTCTTCGGCTCCCCGCCCGGATACGTGGGCTACGAGGAGGGCGGCCAGCTCACCGAGAAGGTGCGCCGCAAGC
CGTTCTCCGTGGTCCTCTTCGACGAGGTCGAGAAGGCCCACCCGGACATCTTCAACTCGCTGCTCCAGATCCTGGAGGAC
GGTCGGCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTGATCATCATGACCACCAACCTCGGCACCCG
GGACATCTCCAAGGGCTTCAACCTGGGCTTCGCCGCCCAGGGCGATGTGAAGACCGGCTACGAGCGGATGAAGAACAAGG
TCAACGAGGAGCTGAAGCAGCACTTCCGGCCCGAGTTCCTCAACCGTGTCGACGACACGGTCGTCTTCCACCAGCTCACC
GAGGAAGACATCATCCAGATCGTCGACCTCATGATCACCAAGGTGGACGAGCGGCTCAAGGACCGCGACATGGGCATCGA
GCTCAGTGGCGTCGCCAAGAAGCTGCTCGCCAAGCGGGGCTATGACCCCGTGCTGGGTGCCCGGCCGCTGCGCCGGACCA
TTCAGCGGGAAATCGAGGACGTGCTGTCGGAGAAGATTCTCTTCGGCGAGCTGCGTCCGGGCCACATCGTGGTCGTGGAC
ACCGAGGGCGAGGGTGAGGAGAAGAAGTTCACCTTCCGCGGCGAGGAGAAGTCGGCGCTGCCGGACACCCCGCCGATCGA
GTCCGCCGCCGGTGGAGGCCCGAACCTGAGCAAGGACGCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
61.596 |
95.476 |
0.588 |
| clpC | Streptococcus mutans UA159 |
44.337 |
98.81 |
0.438 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
44.665 |
95.952 |
0.429 |
| clpC | Streptococcus thermophilus LMD-9 |
42.738 |
100 |
0.427 |
| clpC | Streptococcus thermophilus LMG 18311 |
42.619 |
100 |
0.426 |
| clpC | Streptococcus pneumoniae D39 |
44.085 |
95.595 |
0.421 |
| clpC | Streptococcus pneumoniae Rx1 |
44.085 |
95.595 |
0.421 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.11 |
95 |
0.419 |
| clpE | Streptococcus mutans UA159 |
53.674 |
74.524 |
0.4 |
| clpE | Streptococcus pneumoniae D39 |
51.887 |
75.714 |
0.393 |
| clpE | Streptococcus pneumoniae R6 |
51.887 |
75.714 |
0.393 |
| clpE | Streptococcus pneumoniae Rx1 |
51.887 |
75.714 |
0.393 |
| clpE | Streptococcus pneumoniae TIGR4 |
51.887 |
75.714 |
0.393 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.258 |
73.81 |
0.386 |