Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   DE8555_RS10110 Genome accession   NZ_CP012393
Coordinates   1943953..1944648 (-) Length   231 a.a.
NCBI ID   WP_002215704.1    Uniprot ID   Q7DDR6
Organism   Neisseria meningitidis strain DE8555     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1938953..1949648
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DE8555_RS10100 (DE8555_1892) - 1941226..1942032 (-) 807 WP_002221447.1 inner membrane protein YpjD -
  DE8555_RS10105 (DE8555_1893) ffh 1942252..1943622 (+) 1371 WP_002221448.1 signal recognition particle protein -
  DE8555_RS10110 (DE8555_1894) dsbA2 1943953..1944648 (-) 696 WP_002215704.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  DE8555_RS10115 (DE8555_1895) - 1944819..1945478 (-) 660 WP_002218694.1 NYN domain-containing protein -
  DE8555_RS10120 (DE8555_1896) - 1945681..1947792 (-) 2112 WP_002221449.1 TonB-dependent receptor -
  DE8555_RS10125 (DE8555_1897) - 1947978..1948583 (-) 606 WP_002218691.1 nitroreductase family protein -
  DE8555_RS10130 (DE8555_1898) - 1948632..1949030 (-) 399 WP_002216361.1 DoxX family protein -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25419.90 Da        Isoelectric Point: 5.1502

>NTDB_id=154185 DE8555_RS10110 WP_002215704.1 1943953..1944648(-) (dsbA2) [Neisseria meningitidis strain DE8555]
MKLKTLALTSLTLLALAACSKQAETSVPADSAQSSSSAPAAPAELNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=154185 DE8555_RS10110 WP_002215704.1 1943953..1944648(-) (dsbA2) [Neisseria meningitidis strain DE8555]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGTGT
TCCGGCAGACAGCGCCCAAAGCAGCTCATCTGCTCCGGCAGCCCCTGCTGAGTTGAACGAAGGTGTGAACTACACTGTAT
TGTCTACGCCTATTCCGCAACAGCAGGCCGGTAAAATCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATTGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCTGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterproScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q7DDR6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

100

100

1

  dsbA1 Neisseria meningitidis MC58

71.245

100

0.719


Multiple sequence alignment