Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   DE10444_RS01625 Genome accession   NZ_CP012392
Coordinates   307517..308212 (+) Length   231 a.a.
NCBI ID   WP_002228949.1    Uniprot ID   -
Organism   Neisseria meningitidis strain DE10444     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 302517..313212
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DE10444_RS01605 (DE10444_0294) - 302951..303349 (+) 399 WP_002216361.1 DoxX family protein -
  DE10444_RS01610 (DE10444_0295) - 303398..304003 (+) 606 WP_002230218.1 nitroreductase family protein -
  DE10444_RS01615 (DE10444_0296) - 304189..306300 (+) 2112 WP_002230219.1 TonB-dependent receptor -
  DE10444_RS01620 (DE10444_0297) - 306801..307343 (+) 543 WP_002228952.1 NYN domain-containing protein -
  DE10444_RS01625 (DE10444_0298) dsbA2 307517..308212 (+) 696 WP_002228949.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  DE10444_RS01630 (DE10444_0299) ffh 308543..309913 (-) 1371 WP_002230221.1 signal recognition particle protein -
  DE10444_RS01635 (DE10444_0300) - 310134..310940 (+) 807 WP_002228954.1 inner membrane protein YpjD -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25476.01 Da        Isoelectric Point: 5.1502

>NTDB_id=154106 DE10444_RS01625 WP_002228949.1 307517..308212(+) (dsbA2) [Neisseria meningitidis strain DE10444]
MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPVELNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=154106 DE10444_RS01625 WP_002228949.1 307517..308212(+) (dsbA2) [Neisseria meningitidis strain DE10444]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGTCCAAAGCAGCTCATCTGCTCCGGCAGCCCCTGTTGAGTTGAACGAAGGTGTGAACTACACTGTAT
TGTCTACGCCTATTCCGCAACAGCAGGCCGGTAAAATCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATTGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCCGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterproScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

99.134

100

0.991

  dsbA1 Neisseria meningitidis MC58

70.815

100

0.714


Multiple sequence alignment