Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   AS891_RS14425 Genome accession   NZ_CP015375
Coordinates   2689581..2690198 (+) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis subsp. subtilis strain KCTC 3135     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2684581..2695198
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AS891_RS14390 (AS891_14385) ynzD 2684823..2684996 (+) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  AS891_RS14395 (AS891_14390) yneF 2685070..2685288 (-) 219 WP_003221221.1 YneF family protein -
  AS891_RS14400 (AS891_14395) sirA 2685374..2685820 (-) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  AS891_RS14405 (AS891_14400) recP/tkt 2685973..2687976 (-) 2004 WP_003245397.1 transketolase Machinery gene
  AS891_RS14410 (AS891_14405) ynzC 2688145..2688378 (-) 234 WP_003231595.1 DUF896 domain-containing protein -
  AS891_RS14415 (AS891_14410) dinL 2688442..2689095 (-) 654 WP_003231596.1 YneB family resolvase-like protein -
  AS891_RS14420 (AS891_14415) yneA 2689114..2689431 (-) 318 WP_003231598.1 cell division suppressor protein YneA -
  AS891_RS14425 (AS891_14420) dinR/lexA 2689581..2690198 (+) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  AS891_RS23180 - 2690535..2690831 (-) 297 WP_223257629.1 hypothetical protein -
  AS891_RS14435 (AS891_14430) fosM 2690740..2691174 (-) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  AS891_RS14440 (AS891_14435) - 2691382..2691831 (+) 450 WP_003245454.1 YndM family protein -
  AS891_RS14445 (AS891_14440) pghL 2691858..2692616 (-) 759 WP_003245793.1 gamma-polyglutamate hydrolase PghL -
  AS891_RS14450 (AS891_14445) - 2692842..2693156 (-) 315 WP_003245621.1 hypothetical protein -
  AS891_RS14455 (AS891_14450) yndJ 2693244..2694884 (-) 1641 WP_003231612.1 YndJ family protein -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=153645 AS891_RS14425 WP_003238209.1 2689581..2690198(+) (dinR/lexA) [Bacillus subtilis subsp. subtilis strain KCTC 3135]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=153645 AS891_RS14425 WP_003238209.1 2689581..2690198(+) (dinR/lexA) [Bacillus subtilis subsp. subtilis strain KCTC 3135]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGTTCTACTGTCCACGGCCATTTGGCCCGTTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1