Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   Aba3207_RS12680 Genome accession   NZ_CP015364
Coordinates   2606151..2606786 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain 3207     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2601151..2611786
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Aba3207_RS12665 (Aba3207_12665) - 2601938..2603122 (+) 1185 WP_000939105.1 S41 family peptidase -
  Aba3207_RS12670 (Aba3207_12670) - 2603126..2604547 (-) 1422 WP_000840550.1 sigma-54-dependent transcriptional regulator -
  Aba3207_RS12675 (Aba3207_12675) - 2604571..2606140 (-) 1570 Protein_2504 sensor histidine kinase -
  Aba3207_RS12680 (Aba3207_12680) letA 2606151..2606786 (-) 636 WP_000633799.1 response regulator Regulator
  Aba3207_RS12685 (Aba3207_12685) pbpG 2606999..2608045 (+) 1047 WP_031946417.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  Aba3207_RS12690 (Aba3207_12690) thrC 2608153..2609292 (-) 1140 WP_000063593.1 threonine synthase -
  Aba3207_RS12695 (Aba3207_12695) - 2609348..2610649 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  Aba3207_RS12700 (Aba3207_12700) - 2610894..2611709 (-) 816 WP_000011163.1 DsbC family protein -

Sequence


Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=153531 Aba3207_RS12680 WP_000633799.1 2606151..2606786(-) (letA) [Acinetobacter baumannii strain 3207]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=153531 Aba3207_RS12680 WP_000633799.1 2606151..2606786(-) (letA) [Acinetobacter baumannii strain 3207]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55

  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55


Multiple sequence alignment