Detailed information NTG0153480

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AKO66_RS03085
• Genome accession: NZ_CP012330
• Coordinates: 624039..625214 (+)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain NJ-V
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 619039..630214

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AKO66_RS03065 (AKO66_03055)	tuaH	619580..620827 (+)	1248	WP_057078991.1	teichuronic acid biosynthesis protein TuaH	-
AKO66_RS03070 (AKO66_03060)	-	620962..622029 (+)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-
AKO66_RS03075 (AKO66_03065)	-	622067..623164 (-)	1098	WP_007499958.1	LCP family protein	-
AKO66_RS03080 (AKO66_03070)	-	623149..623817 (-)	669	WP_017357860.1	YigZ family protein	-
AKO66_RS03085 (AKO66_03075)	degS	624039..625214 (+)	1176	WP_003213166.1	sensor histidine kinase	Regulator
AKO66_RS03090 (AKO66_03080)	degU	625279..625968 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
AKO66_RS03095 (AKO66_03085)	-	626180..627022 (+)	843	WP_024719242.1	DegV family protein	-
AKO66_RS03100 (AKO66_03090)	comFA	627142..628521 (+)	1380	WP_141116131.1	DEAD/DEAH box helicase	Machinery gene
AKO66_RS03105 (AKO66_03095)	-	628586..628879 (+)	294	WP_035701582.1	late competence development ComFB family protein	-
AKO66_RS03110 (AKO66_03100)	comFC	628981..629562 (+)	582	WP_234781022.1	ComF family protein	Machinery gene
AKO66_RS03115 (AKO66_03105)	-	629619..630038 (+)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=153480 AKO66_RS03085 WP_003213166.1 624039..625214(+) (degS) [Bacillus altitudinis strain NJ-V]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=153480 AKO66_RS03085 WP_003213166.1 624039..625214(+) (degS) [Bacillus altitudinis strain NJ-V]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGATGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATAGAACGGATTTTTAGAGACCGTG
GAACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCTTAGGTGATACTGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCAGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841