Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   A6E92_RS18345 Genome accession   NZ_CP015362
Coordinates   4305359..4306483 (-) Length   374 a.a.
NCBI ID   WP_028416141.1    Uniprot ID   A0ABY2P794
Organism   Streptomyces sp. S8     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4300359..4311483
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6E92_RS18320 (A6E92_17985) cseB 4300576..4301289 (-) 714 WP_018489324.1 two-component system response regulator CseB -
  A6E92_RS18325 (A6E92_17990) - 4301308..4301958 (-) 651 WP_084994361.1 hypothetical protein -
  A6E92_RS18330 (A6E92_17995) - 4302126..4302923 (-) 798 WP_084994364.1 SigE family RNA polymerase sigma factor -
  A6E92_RS18335 (A6E92_18000) - 4303082..4304011 (-) 930 WP_206311907.1 A/G-specific adenine glycosylase -
  A6E92_RS18340 (A6E92_18005) - 4304263..4305117 (+) 855 WP_187330495.1 hypothetical protein -
  A6E92_RS18345 (A6E92_18010) disA 4305359..4306483 (-) 1125 WP_028416141.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  A6E92_RS18350 (A6E92_18015) radA/sms 4306565..4307986 (-) 1422 WP_028416142.1 DNA repair protein RadA Machinery gene
  A6E92_RS18355 (A6E92_18020) - 4308175..4310184 (+) 2010 WP_203237965.1 hypothetical protein -
  A6E92_RS18360 (A6E92_18025) - 4310251..4311093 (-) 843 WP_028416144.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40306.25 Da        Isoelectric Point: 4.9406

>NTDB_id=153459 A6E92_RS18345 WP_028416141.1 4305359..4306483(-) (disA) [Streptomyces sp. S8]
MAANDRAAAPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKACGFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDSLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=153459 A6E92_RS18345 WP_028416141.1 4305359..4306483(-) (disA) [Streptomyces sp. S8]
GTGGCAGCCAACGACCGGGCGGCAGCGCCCGGAAAGTCCGGCCAAGGCACCGGCAACGAAGCGCTGATGCGCGCCTCGTT
GAGCGCGGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAACACCGGCGGGCTGATCGTCC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGGTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGG
GAGCTGTGCAAGCTCGACGGGGCGCTGATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGGGTACAGCTGGTCCC
GGACGCCTCGATCCCCACGGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGGCGTGCGGCTTCCCCG
TCGTCTCGGTCTCGCAGTCCATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCGTCCGCG
ATCCTCTCCCGGGCCAACCAGGCCCTCGCCACGCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTGGCCGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGACGGCGGTGGCGCAGCGGCTGGAGATGGTCCGGCGGATCG
CGACCGAGATCGCGGAGTACGTGGTGGAGCTGGGCACCGACGGCCGGCTCCTCTCGCTCCAGCTGGACGAGCTGATCGCG
GGCGTGGAGCCGGAGCGGGAGCTGGTGGTCCGGGACTATGTGCCCGAGCCGACGGCGAAACGGTCGCGCACGGTGGCGGA
GGCGCTGACGGAGCTGGACTCCCTCAGCCACACGGAGCTGCTGGAGCTGCCGGTGGTGGCGCGGGCGCTGGGGTACAGCG
GCTCGCCGGAGACCCTGGACTCGGCGGTCTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGAGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGGGGCCTGCAGAAGCTGCTGGCCGCGAGCGTGGACGACCTCCAGACCGTGGA
CGGAGTCGGCGAGGCGCGGGCGCGCAGCGTGCGGGAGGGGCTCTCGCGGCTGGCGGAGTCGTCGATCCTGGAACGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436


Multiple sequence alignment