Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | AKO65_RS11885 | Genome accession | NZ_CP012329 |
| Coordinates | 2369346..2370416 (+) | Length | 356 a.a. |
| NCBI ID | WP_081038956.1 | Uniprot ID | - |
| Organism | Bacillus altitudinis strain NJ-M2 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2364346..2375416
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AKO65_RS11855 (AKO65_11855) | - | 2365598..2365912 (+) | 315 | WP_017367597.1 | MTH1187 family thiamine-binding protein | - |
| AKO65_RS19550 | - | 2365937..2366110 (-) | 174 | WP_003217333.1 | DUF2759 domain-containing protein | - |
| AKO65_RS11860 (AKO65_11860) | - | 2366271..2366909 (+) | 639 | WP_017357989.1 | MBL fold metallo-hydrolase | - |
| AKO65_RS11865 (AKO65_11865) | - | 2366958..2367200 (-) | 243 | WP_003217440.1 | DUF2626 domain-containing protein | - |
| AKO65_RS11870 (AKO65_11870) | - | 2367413..2367793 (+) | 381 | WP_007501232.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| AKO65_RS11880 (AKO65_11880) | - | 2368019..2368888 (+) | 870 | WP_007501231.1 | STAS domain-containing protein | - |
| AKO65_RS11885 (AKO65_11885) | comGA | 2369346..2370416 (+) | 1071 | WP_081038956.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AKO65_RS11890 (AKO65_11890) | comGB | 2370397..2371437 (+) | 1041 | WP_057079310.1 | competence type IV pilus assembly protein ComGB | - |
| AKO65_RS11895 (AKO65_11895) | comGC | 2371454..2371747 (+) | 294 | WP_057079311.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AKO65_RS11900 (AKO65_11900) | comGD | 2371740..2372186 (+) | 447 | WP_057079312.1 | competence type IV pilus minor pilin ComGD | - |
| AKO65_RS11905 (AKO65_11905) | comGE | 2372170..2372484 (+) | 315 | WP_057079313.1 | competence type IV pilus minor pilin ComGE | - |
| AKO65_RS11910 (AKO65_11910) | comGF | 2372426..2372923 (+) | 498 | WP_057079314.1 | competence type IV pilus minor pilin ComGF | - |
| AKO65_RS11915 (AKO65_11915) | - | 2372920..2373303 (+) | 384 | WP_057079315.1 | competence type IV pilus minor pilin ComGG | - |
| AKO65_RS11920 (AKO65_11920) | - | 2373364..2373552 (+) | 189 | WP_017367591.1 | YqzE family protein | - |
| AKO65_RS11925 (AKO65_11925) | - | 2373587..2373913 (-) | 327 | WP_048001387.1 | DUF3889 domain-containing protein | - |
| AKO65_RS11930 (AKO65_11930) | tapA | 2374166..2374693 (+) | 528 | WP_017367589.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AKO65_RS11935 (AKO65_11935) | sipW | 2374744..2375316 (+) | 573 | WP_017357979.1 | signal peptidase I SipW | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40373.72 Da Isoelectric Point: 9.0449
>NTDB_id=153442 AKO65_RS11885 WP_081038956.1 2369346..2370416(+) (comGA) [Bacillus altitudinis strain NJ-M2]
MYGIEYLGQELLEEACRMRASDVHIVPREKEASVSFRVDADLIQQRIIDKKSGERLIAHFKFLSSMDIGERRRPQNGSLA
VMLRRGQVFVRLSTLPTVNDESLVIRILPQDHVPKTKYLSLFPKASARLLSFLNHSHGLILFTGPTNSGKTTTLYSLIQF
AKKHFNRNIITLEDPVETRNEEVLQVQVNEKAGITYAAGLRAILRHDPDMIVLGEIRDAETARTAIRAALTGHLVMSTLH
AKNAKGALYRMLEFGVTMNELEQTMVAIAAQRLIELACPFCGETCELYCKLNRPVRRTNVFELLYGKELGECIKEAKGEY
AHSSYETLQRLIRKGVALGYLSKSTYHRWVYEEASF
MYGIEYLGQELLEEACRMRASDVHIVPREKEASVSFRVDADLIQQRIIDKKSGERLIAHFKFLSSMDIGERRRPQNGSLA
VMLRRGQVFVRLSTLPTVNDESLVIRILPQDHVPKTKYLSLFPKASARLLSFLNHSHGLILFTGPTNSGKTTTLYSLIQF
AKKHFNRNIITLEDPVETRNEEVLQVQVNEKAGITYAAGLRAILRHDPDMIVLGEIRDAETARTAIRAALTGHLVMSTLH
AKNAKGALYRMLEFGVTMNELEQTMVAIAAQRLIELACPFCGETCELYCKLNRPVRRTNVFELLYGKELGECIKEAKGEY
AHSSYETLQRLIRKGVALGYLSKSTYHRWVYEEASF
Nucleotide
Download Length: 1071 bp
>NTDB_id=153442 AKO65_RS11885 WP_081038956.1 2369346..2370416(+) (comGA) [Bacillus altitudinis strain NJ-M2]
TTGTATGGTATTGAATATTTGGGACAAGAGCTACTAGAAGAGGCGTGTCGCATGAGAGCATCTGATGTGCATATTGTTCC
GAGAGAAAAGGAAGCTTCAGTCTCTTTTCGTGTAGACGCTGACCTCATTCAGCAGCGGATCATTGACAAAAAGAGCGGAG
AGCGGCTCATTGCTCATTTCAAATTTTTATCTTCTATGGATATTGGTGAAAGAAGGAGACCACAAAATGGGTCATTGGCT
GTGATGCTAAGACGCGGTCAAGTGTTTGTTCGGCTCTCTACACTACCGACTGTAAATGATGAAAGTCTAGTGATTCGGAT
TTTACCGCAGGATCATGTGCCGAAAACAAAGTATTTGTCACTGTTCCCGAAGGCTTCAGCGAGATTATTATCGTTTCTGA
ATCATTCGCATGGGCTCATTTTATTTACTGGACCAACAAATTCAGGGAAAACGACAACACTTTATTCATTGATTCAGTTT
GCCAAAAAACATTTTAATCGAAATATTATTACCCTTGAAGATCCTGTGGAAACAAGAAATGAAGAAGTGCTGCAGGTTCA
AGTAAATGAAAAAGCTGGTATCACGTATGCGGCAGGTTTACGCGCTATTTTAAGACATGATCCAGATATGATTGTGCTTG
GAGAAATAAGAGATGCGGAAACAGCCAGAACAGCTATTAGAGCAGCTTTGACAGGTCATTTAGTCATGAGCACACTGCAT
GCAAAAAATGCAAAAGGAGCTCTTTATCGAATGCTGGAATTTGGAGTGACGATGAATGAACTCGAACAAACAATGGTTGC
CATTGCTGCTCAGCGGTTAATCGAACTCGCATGTCCATTTTGCGGCGAAACGTGTGAGCTTTATTGCAAACTAAATCGAC
CAGTCAGACGAACAAATGTATTTGAATTGCTTTACGGAAAGGAGCTTGGTGAGTGTATCAAAGAGGCAAAAGGAGAATAC
GCTCATTCGTCATACGAAACACTCCAAAGATTAATTCGGAAAGGAGTGGCACTCGGCTATTTATCAAAAAGCACATATCA
TCGCTGGGTTTATGAAGAAGCGAGCTTCTAA
TTGTATGGTATTGAATATTTGGGACAAGAGCTACTAGAAGAGGCGTGTCGCATGAGAGCATCTGATGTGCATATTGTTCC
GAGAGAAAAGGAAGCTTCAGTCTCTTTTCGTGTAGACGCTGACCTCATTCAGCAGCGGATCATTGACAAAAAGAGCGGAG
AGCGGCTCATTGCTCATTTCAAATTTTTATCTTCTATGGATATTGGTGAAAGAAGGAGACCACAAAATGGGTCATTGGCT
GTGATGCTAAGACGCGGTCAAGTGTTTGTTCGGCTCTCTACACTACCGACTGTAAATGATGAAAGTCTAGTGATTCGGAT
TTTACCGCAGGATCATGTGCCGAAAACAAAGTATTTGTCACTGTTCCCGAAGGCTTCAGCGAGATTATTATCGTTTCTGA
ATCATTCGCATGGGCTCATTTTATTTACTGGACCAACAAATTCAGGGAAAACGACAACACTTTATTCATTGATTCAGTTT
GCCAAAAAACATTTTAATCGAAATATTATTACCCTTGAAGATCCTGTGGAAACAAGAAATGAAGAAGTGCTGCAGGTTCA
AGTAAATGAAAAAGCTGGTATCACGTATGCGGCAGGTTTACGCGCTATTTTAAGACATGATCCAGATATGATTGTGCTTG
GAGAAATAAGAGATGCGGAAACAGCCAGAACAGCTATTAGAGCAGCTTTGACAGGTCATTTAGTCATGAGCACACTGCAT
GCAAAAAATGCAAAAGGAGCTCTTTATCGAATGCTGGAATTTGGAGTGACGATGAATGAACTCGAACAAACAATGGTTGC
CATTGCTGCTCAGCGGTTAATCGAACTCGCATGTCCATTTTGCGGCGAAACGTGTGAGCTTTATTGCAAACTAAATCGAC
CAGTCAGACGAACAAATGTATTTGAATTGCTTTACGGAAAGGAGCTTGGTGAGTGTATCAAAGAGGCAAAAGGAGAATAC
GCTCATTCGTCATACGAAACACTCCAAAGATTAATTCGGAAAGGAGTGGCACTCGGCTATTTATCAAAAAGCACATATCA
TCGCTGGGTTTATGAAGAAGCGAGCTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
65.254 |
99.438 |
0.649 |