Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   V471_RS06975 Genome accession   NZ_CP015283
Coordinates   1491789..1493537 (+) Length   582 a.a.
NCBI ID   WP_045768620.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ATCC 25975     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1486789..1498537
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V471_RS06955 (V471_06855) glyA 1487182..1488432 (+) 1251 WP_002891158.1 serine hydroxymethyltransferase -
  V471_RS06960 (V471_06860) - 1488438..1489415 (+) 978 WP_004182031.1 nucleoid-associated protein -
  V471_RS06965 (V471_06865) - 1489417..1490028 (+) 612 WP_037611402.1 lysozyme family protein -
  V471_RS06970 (V471_06870) - 1490060..1491799 (+) 1740 WP_049554088.1 ABC transporter ATP-binding protein -
  V471_RS06975 (V471_06875) rcrQ 1491789..1493537 (+) 1749 WP_045768620.1 ABC transporter ATP-binding protein Regulator
  V471_RS06980 (V471_06880) - 1493714..1493845 (+) 132 WP_002885174.1 teichoic acid D-Ala incorporation-associated protein DltX -
  V471_RS06985 (V471_06885) dltA 1493854..1495404 (+) 1551 WP_049554089.1 D-alanine--poly(phosphoribitol) ligase subunit DltA -
  V471_RS06990 (V471_06890) dltB 1495401..1496648 (+) 1248 WP_049554090.1 D-alanyl-lipoteichoic acid biosynthesis protein DltB -
  V471_RS06995 (V471_06895) dltC 1496666..1496905 (+) 240 WP_002891149.1 D-alanine--poly(phosphoribitol) ligase subunit DltC -
  V471_RS07000 (V471_06900) dltD 1496898..1498166 (+) 1269 WP_070847341.1 D-alanyl-lipoteichoic acid biosynthesis protein DltD -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 65501.06 Da        Isoelectric Point: 7.9783

>NTDB_id=153181 V471_RS06975 WP_045768620.1 1491789..1493537(+) (rcrQ) [Streptococcus salivarius strain ATCC 25975]
MKARNNKSTLKRLSRDILSQRYLFALATVGTIIQVALTVYLPILIGDAVDAVLKMNAVLLMSRLIWQMLVVILANSAIQW
LNPLIYNRLIYSYSESLRERVMMKIHAMPLSYLDRQGTGDMVSRVTTDSDQLNNGLLMVFNQFFVGLLTIFVIIFTMARL
DWFMMLLVLVMTPLSMLVARFIAKKSYQLYRNQTKWRGMQTQLIEESLTQEALVQSLNAQDQMVRSFKDVNGKYADYSQG
AIFYSSAVNPATRFVNSLIYALIAGVGAYRIMSGGAFTVGQLTTFLNYVTQYTKPFNDISSVLSELQSALACADRLYMIL
DEEEITETGKVVLEEADVQGRFQFDHVQFGYLPNKPLIKDLSIDILAASTVAIVGPTGAGKSTLINLLMRFYDLDKGNIL
LDGRPITDYTRESLRKQIGMVLQETWLEVGTIHDNIAYGNPEASREEVIAAAKAANADFFIKQLPQGYDTYLNDAGQSLS
QGQRQLLTIARIFVNVPKILILDEATSSIDTRTELLIQEAFAKLMKGRTSFIIAHRLSTIENADLILVMNNGDIVEHGTH
ERLMQAKGMYYRMQTAQKTQNS

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=153181 V471_RS06975 WP_045768620.1 1491789..1493537(+) (rcrQ) [Streptococcus salivarius strain ATCC 25975]
ATGAAGGCTAGAAATAATAAATCAACGCTTAAACGTTTAAGTAGAGATATCTTAAGTCAGCGTTACCTCTTTGCCTTAGC
AACTGTTGGGACCATTATTCAAGTTGCCTTAACGGTTTACTTACCTATCTTAATTGGTGATGCAGTGGACGCTGTTCTTA
AGATGAACGCCGTTCTATTGATGTCACGTTTAATTTGGCAGATGCTTGTAGTTATCTTAGCTAATAGTGCAATCCAGTGG
CTTAACCCTTTGATTTATAATCGATTGATTTATTCATATAGCGAAAGTTTACGTGAACGAGTCATGATGAAAATTCATGC
TATGCCTCTCAGTTACCTTGATCGTCAAGGAACTGGAGACATGGTTAGCCGTGTGACTACAGATAGCGATCAGTTAAACA
ACGGACTTCTCATGGTCTTTAACCAATTTTTCGTTGGGCTTTTGACTATTTTTGTCATAATCTTTACCATGGCTCGCTTA
GACTGGTTCATGATGCTCTTAGTCCTAGTCATGACGCCTTTGTCAATGCTTGTGGCACGTTTTATCGCAAAGAAGAGTTA
TCAACTCTATCGCAATCAAACTAAATGGCGAGGCATGCAGACTCAGTTGATTGAAGAAAGTTTGACTCAAGAAGCTTTAG
TACAGAGTTTAAATGCACAAGACCAGATGGTTAGGAGTTTTAAAGACGTCAATGGTAAGTATGCTGATTATTCACAGGGT
GCTATCTTTTATTCGTCAGCGGTTAACCCAGCTACACGTTTTGTCAATAGTCTGATCTATGCTCTTATTGCAGGTGTTGG
TGCCTATCGGATCATGTCGGGTGGCGCTTTTACAGTGGGACAATTGACTACCTTCCTAAACTATGTGACTCAGTATACGA
AACCTTTTAATGATATCTCATCTGTTCTATCTGAACTTCAAAGTGCTTTGGCCTGTGCTGATCGCCTTTATATGATATTG
GATGAAGAGGAAATAACAGAAACAGGTAAGGTGGTTTTGGAAGAAGCAGATGTGCAGGGACGTTTTCAATTTGACCATGT
CCAATTTGGTTATTTGCCTAATAAACCTCTTATCAAGGATTTGAGCATTGATATCCTTGCCGCAAGTACTGTTGCCATTG
TTGGTCCAACAGGAGCGGGAAAATCTACCTTGATTAACCTGCTCATGCGTTTCTATGATTTGGACAAGGGGAACATTCTA
CTGGACGGTAGACCTATTACAGATTATACTCGTGAGAGTCTTCGGAAACAGATTGGGATGGTCTTGCAGGAAACTTGGCT
TGAGGTTGGCACTATTCATGATAATATTGCCTATGGAAATCCCGAAGCCAGTCGTGAAGAAGTTATAGCAGCAGCCAAGG
CTGCCAATGCAGATTTCTTTATTAAGCAGTTGCCTCAAGGCTATGACACCTACTTGAATGACGCGGGGCAATCCCTTTCT
CAGGGACAACGTCAGCTTTTGACTATTGCCCGCATATTTGTCAATGTGCCTAAAATCTTAATCTTGGATGAAGCCACTTC
TAGTATTGATACTCGTACAGAGCTCCTCATTCAAGAGGCCTTCGCTAAATTAATGAAAGGTCGAACAAGTTTCATCATTG
CCCATCGATTGTCTACCATCGAAAATGCGGACCTTATTTTGGTCATGAATAATGGGGATATCGTTGAACACGGAACCCAT
GAACGACTGATGCAAGCTAAGGGAATGTACTATCGTATGCAGACGGCCCAAAAGACACAAAATAGTTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(359-507)

ABC transporter transmembrane region (ABC_membrane)

(25-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.973

100

0.38

Multiple sequence alignment