Detailed information NTG0153129

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: V471_RS02735
• Genome accession: NZ_CP015283
• Coordinates: 529406..530506 (+)
• Length: 366 a.a.
• NCBI ID: WP_013991340.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain ATCC 25975
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 524406..535506

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V471_RS02710 (V471_02685)	pgsA	524948..525490 (-)	543	WP_002885640.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
V471_RS02715 (V471_02690)	-	525503..526360 (-)	858	WP_013991336.1	helix-turn-helix domain-containing protein	-
V471_RS02720 (V471_02695)	yfmH	526419..527696 (-)	1278	WP_014632479.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
V471_RS02725 (V471_02700)	yfmF	527698..528948 (-)	1251	WP_013991338.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
V471_RS02730 (V471_02705)	yaaA	529026..529403 (+)	378	WP_013991339.1	S4 domain-containing protein YaaA	-
V471_RS02735 (V471_02710)	recF	529406..530506 (+)	1101	WP_013991340.1	DNA replication/repair protein RecF	Machinery gene
V471_RS02740 (V471_02715)	guaB	530688..532169 (-)	1482	WP_013991341.1	IMP dehydrogenase	-
V471_RS02745 (V471_02720)	trpS	532348..533370 (-)	1023	WP_084871082.1	tryptophan--tRNA ligase	-
V471_RS02750 (V471_02725)	-	533799..534671 (+)	873	WP_014632477.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42233.26 Da
• Isoelectric Point: 7.7930

>NTDB_id=153129 V471_RS02735 WP_013991340.1 529406..530506(+) (recF) [Streptococcus salivarius strain ATCC 25975]
MWLEKIDIQHFRNYTEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTRSDKELIQFQQNTLKLNGIVHRHSGK
LPLEISLSNKGRITKVNHLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSSYNHVLKQR
NAYLKSTDNVDINFLSVLDEQLSDFGTRVIEHRLEFIKQLEEEADRHHSNLSNQIERLKISYESNIPLENNKVIRESFLT
TLKQNHKRDIFKKNTGVGPHRDDLTFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTGEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPDLKTFLVKNGDIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=153129 V471_RS02735 WP_013991340.1 529406..530506(+) (recF) [Streptococcus salivarius strain ATCC 25975]
ATGTGGCTCGAAAAAATTGATATTCAACACTTTAGAAATTATACTGAAGCCTCTGTGAGCTTCTCACCTCATCTCAATAT
TTTTCTTGGTCGCAATGCCCAAGGAAAAACAAATATTCTTGAGGCCATCTATTTTCTAGCATTGACACGTAGTCATCGGA
CCCGTTCAGATAAAGAACTGATTCAATTTCAACAAAATACTCTCAAACTGAACGGCATCGTGCATCGTCATAGTGGGAAG
CTACCTCTGGAAATCAGTTTATCTAATAAAGGACGCATAACAAAGGTTAACCACCTCAAACAAGCTAAATTATCCGATTA
TATCGGTCACATGACTGTGGTGCTATTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGCCTGAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTATCTCTCAGACTTATCAAGTTATAATCATGTACTCAAACAACGT
AATGCTTATCTCAAATCTACTGACAATGTAGACATTAATTTCCTCTCAGTGTTAGATGAACAGCTTTCCGATTTTGGAAC
ACGAGTTATCGAACATAGACTAGAATTTATCAAGCAATTAGAGGAGGAGGCAGATAGACATCATAGTAACCTCTCAAATC
AGATAGAGCGCCTTAAAATCTCCTACGAATCTAATATCCCACTGGAAAATAACAAAGTTATTCGCGAATCATTTTTAACC
ACGTTAAAGCAAAATCACAAAAGAGATATCTTCAAAAAGAACACTGGTGTTGGTCCGCATAGGGATGATTTAACATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAGGGGCAGCAACGTAGTCTCATACTTTCTTTAAAAATGGCTGAGATTG
CTCTGATAAAAAAAGTAACAGGTGAATTTCCTATTCTTCTCCTCGATGATGTCATGAGTGAGCTTGACAATCACCGTCAA
CTTAAACTGTTAGAAAGTATTGACGAAGAGGTTCAAACCTTCATGACGACAACTTCACTTGATCATCTGAGTAACCTACC
ACCTGATTTAAAGACCTTCTTAGTTAAGAATGGTGATATTTATGAAAAACAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-343)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.084	97.814	0.637
recF	Bacillus subtilis subsp. subtilis str. 168	44.142	100	0.443