Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   NX99_RS04540 Genome accession   NZ_CP015282
Coordinates   1059665..1060471 (-) Length   268 a.a.
NCBI ID   WP_037599638.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ATCC 27945     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1054665..1065471
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX99_RS04510 (NX99_04430) - 1055423..1056001 (-) 579 WP_084914917.1 HD domain-containing protein -
  NX99_RS04515 (NX99_04435) - 1056018..1056674 (-) 657 WP_060972512.1 glucosaminidase domain-containing protein -
  NX99_RS04520 (NX99_04440) - 1056765..1057106 (-) 342 WP_080610313.1 P-II family nitrogen regulator -
  NX99_RS04525 (NX99_04445) - 1057117..1058352 (-) 1236 WP_084914918.1 ammonium transporter -
  NX99_RS04530 (NX99_04450) rsmI 1058489..1059355 (-) 867 WP_002890224.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  NX99_RS04535 (NX99_04455) yabA 1059358..1059678 (-) 321 WP_002887582.1 DNA replication initiation control protein YabA -
  NX99_RS04540 (NX99_04460) yaaT 1059665..1060471 (-) 807 WP_037599638.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  NX99_RS04545 (NX99_04465) - 1060468..1061343 (-) 876 WP_084914920.1 DNA polymerase III subunit delta' -
  NX99_RS04550 (NX99_04470) tmk 1061352..1061981 (-) 630 WP_073689633.1 dTMP kinase -
  NX99_RS04560 (NX99_04480) recP/tkt 1062291..1064276 (-) 1986 WP_084914921.1 transketolase Machinery gene
  NX99_RS04565 (NX99_04485) tpiA 1064538..1065296 (-) 759 WP_002890214.1 triose-phosphate isomerase -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29718.14 Da        Isoelectric Point: 4.6456

>NTDB_id=153014 NX99_RS04540 WP_037599638.1 1059665..1060471(-) (yaaT) [Streptococcus salivarius strain ATCC 27945]
MTEVIGIKFEETGAVEYVVPDKNYAKDDFVVVLEKKDKRLAQVVMENTDFPEVSLPADLNRVEGLAGEKDFARYDENLLK
AEKSMGVVADLIAQNQLEMKVVDIVFPLNCSYVLISFVAEKRVDFRQLLKDLASYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGDDIETKDGTGQVVAIDVI
AGTIKVVFEKGRAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=153014 NX99_RS04540 WP_037599638.1 1059665..1060471(-) (yaaT) [Streptococcus salivarius strain ATCC 27945]
ATGACAGAAGTCATTGGAATAAAATTTGAGGAAACTGGAGCAGTAGAATATGTTGTTCCTGATAAAAATTATGCCAAAGA
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGCCTAGCCCAGGTTGTCATGGAAAACACTGATTTTCCTGAGGTTA
GTTTGCCTGCGGATTTGAATCGGGTTGAAGGATTGGCAGGAGAGAAAGATTTTGCTAGATATGATGAAAATCTTTTGAAG
GCTGAAAAGAGTATGGGAGTAGTAGCTGATTTAATTGCTCAAAATCAGCTAGAAATGAAGGTGGTTGACATTGTCTTTCC
GCTAAATTGCTCTTATGTGCTAATCAGTTTTGTTGCTGAAAAACGGGTAGATTTTCGTCAATTGCTCAAAGATCTGGCTT
CTTACTTTAAGACACGTATTGAGTTGCGCCAAATTTCGAGTCGTGAGGAATCAAAGATTTATGGTGGCCTAGGACCTTGT
GGCCGAGCACTTTGTTGTTCTAGTTTTTTGGGTGAATTCCCACCAGTATCAATTAAGATGGCTAAAAATCAGAGTTTATC
TTTGAATTCTGGTAAGATGAATGGGGTCTGTGGTCGACTTATGTGTTGTCTCAGTTATGAAGATGACTTTTACCGAGATA
GCAAGGCTAGTTATCCTGACTTGGGTGATGACATTGAAACCAAGGATGGCACAGGTCAGGTCGTTGCCATTGATGTAATT
GCAGGGACTATTAAGGTTGTATTTGAAAAAGGGCGTGCGCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

41.948

99.627

0.418