Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   NX99_RS00690 Genome accession   NZ_CP015282
Coordinates   245581..246261 (+) Length   226 a.a.
NCBI ID   WP_004182305.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ATCC 27945     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 240581..251261
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX99_RS00670 (NX99_00665) - 240630..241463 (-) 834 WP_084914392.1 helix-turn-helix domain-containing protein -
  NX99_RS00675 (NX99_00670) - 241596..243161 (+) 1566 WP_232313540.1 ABC transporter ATP-binding protein -
  NX99_RS00680 (NX99_00675) - 243283..244551 (-) 1269 WP_084914394.1 nucleobase:cation symporter-2 family protein -
  NX99_RS00685 (NX99_00680) - 244551..245132 (-) 582 WP_084914395.1 xanthine phosphoribosyltransferase -
  NX99_RS00690 (NX99_00685) braR 245581..246261 (+) 681 WP_004182305.1 response regulator transcription factor Regulator
  NX99_RS00695 (NX99_00690) - 246251..247225 (+) 975 WP_084869599.1 sensor histidine kinase -
  NX99_RS00700 (NX99_00695) - 247370..248128 (+) 759 WP_084914397.1 ABC transporter ATP-binding protein -
  NX99_RS00705 (NX99_00700) - 248130..250130 (+) 2001 WP_084914398.1 ABC transporter permease -
  NX99_RS00710 (NX99_00705) - 250215..250709 (+) 495 WP_084914400.1 YkgJ family cysteine cluster protein -

Sequence

Protein


Download         Length: 226 a.a.        Molecular weight: 26073.42 Da        Isoelectric Point: 4.9992

>NTDB_id=152983 NX99_RS00690 WP_004182305.1 245581..246261(+) (braR) [Streptococcus salivarius strain ATCC 27945]
MHKILLVEDDEVIRQQVKKMLEQWGYEVVLVEDFMEVLSIFVKVEPHLVLMDIGLPLFNGYHWCQEIRKVSKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDQNVLLAKIQGLLRRSYEFGKDQSLLEYMGVILNLKAMDLVYQGEVVSLTKNEFQIL
QVLFDHAGNIVSREDLMKELWNSDFFIDDNTLSVNVARLRKKLEAVGLKDFIETKKGVGYGLRHDG

Nucleotide


Download         Length: 681 bp        

>NTDB_id=152983 NX99_RS00690 WP_004182305.1 245581..246261(+) (braR) [Streptococcus salivarius strain ATCC 27945]
ATGCATAAGATTTTATTAGTGGAGGACGACGAGGTTATCCGTCAACAAGTCAAAAAAATGCTAGAACAGTGGGGTTACGA
AGTTGTTCTTGTTGAAGATTTCATGGAAGTATTATCTATTTTTGTAAAAGTAGAACCTCACTTGGTTCTTATGGATATTG
GTTTACCTCTATTCAACGGTTATCATTGGTGTCAGGAAATTCGTAAGGTCTCCAAGGTGCCTATTATGTTCTTGTCTTCT
AGAGATCAGGCCATGGATATTGTTATGGCAATCAATATGGGCGGGGACGATTTTGTGACGAAACCTTTTGACCAAAATGT
TCTTCTAGCAAAAATTCAAGGGCTTTTGCGTCGTTCTTATGAGTTTGGTAAGGATCAGAGTCTCTTGGAATATATGGGTG
TGATTCTGAACCTTAAGGCCATGGATTTGGTTTATCAGGGTGAGGTCGTTTCTTTGACTAAGAATGAGTTTCAGATTTTA
CAAGTTCTCTTCGATCATGCTGGTAATATCGTTAGTCGGGAAGACCTGATGAAGGAGCTTTGGAACAGTGACTTCTTTAT
TGATGATAATACCTTATCTGTAAATGTAGCTCGTTTACGTAAGAAGTTAGAGGCAGTGGGTTTGAAGGATTTTATTGAAA
CCAAGAAAGGTGTTGGCTACGGGTTGCGTCATGATGGGTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)

Response regulator receiver domain (Response_reg)

(4-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

52.294

96.46

0.504
  micA Streptococcus pneumoniae Cp1015

35.043

100

0.363

Multiple sequence alignment