Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AEI09_RS05280 | Genome accession | NZ_CP012248 |
| Coordinates | 997413..997715 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain CJ514CC45 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 992413..1002715
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI09_RS05255 (AEI09_05285) | rpsR | 992776..993036 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| AEI09_RS05260 (AEI09_05290) | lon | 993096..995471 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| AEI09_RS05265 (AEI09_05295) | bamD | 995488..996135 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| AEI09_RS05270 (AEI09_05300) | fliW | 996296..996685 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| AEI09_RS05275 (AEI09_05305) | proC | 996685..997416 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AEI09_RS05280 (AEI09_05310) | ctsT | 997413..997715 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| AEI09_RS05285 (AEI09_05315) | - | 997712..998374 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| AEI09_RS05290 (AEI09_05320) | - | 998371..998823 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| AEI09_RS05295 (AEI09_05325) | hemD | 998820..999449 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| AEI09_RS05300 (AEI09_05330) | thiE | 999427..1000059 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| AEI09_RS05305 (AEI09_05335) | thiD | 1000049..1000861 (-) | 813 | WP_002871792.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AEI09_RS05310 (AEI09_05340) | - | 1000858..1001544 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| AEI09_RS05315 (AEI09_05345) | - | 1001541..1002302 (-) | 762 | WP_002871793.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=152967 AEI09_RS05280 WP_002853046.1 997413..997715(+) (ctsT) [Campylobacter jejuni strain CJ514CC45]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=152967 AEI09_RS05280 WP_002853046.1 997413..997715(+) (ctsT) [Campylobacter jejuni strain CJ514CC45]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |