Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AEI07_RS05230 | Genome accession | NZ_CP012243 |
| Coordinates | 993958..994260 (+) | Length | 100 a.a. |
| NCBI ID | WP_002877750.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain CJ512CC45 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 988958..999260
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI07_RS05205 (AEI07_05225) | rpsR | 989320..989580 (+) | 261 | WP_052777970.1 | 30S ribosomal protein S18 | - |
| AEI07_RS05210 (AEI07_05230) | lon | 989641..992016 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| AEI07_RS05215 (AEI07_05235) | bamD | 992033..992680 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| AEI07_RS05220 (AEI07_05240) | fliW | 992841..993230 (+) | 390 | WP_002877749.1 | flagellar assembly protein FliW | - |
| AEI07_RS05225 (AEI07_05245) | proC | 993230..993961 (+) | 732 | WP_052777969.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AEI07_RS05230 (AEI07_05250) | ctsT | 993958..994260 (+) | 303 | WP_002877750.1 | hypothetical protein | Machinery gene |
| AEI07_RS05235 (AEI07_05255) | - | 994257..994919 (+) | 663 | WP_002877751.1 | hypothetical protein | - |
| AEI07_RS05240 (AEI07_05260) | - | 994916..995368 (+) | 453 | WP_002877757.1 | hypothetical protein | - |
| AEI07_RS05245 (AEI07_05265) | hemD | 995365..995994 (-) | 630 | WP_002877758.1 | uroporphyrinogen-III synthase | - |
| AEI07_RS05250 (AEI07_05270) | thiE | 995972..996604 (-) | 633 | WP_002877759.1 | thiamine phosphate synthase | - |
| AEI07_RS05255 (AEI07_05275) | thiD | 996594..997406 (-) | 813 | WP_002877760.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AEI07_RS05260 (AEI07_05280) | - | 997403..998089 (-) | 687 | WP_002866108.1 | endonuclease III domain-containing protein | - |
| AEI07_RS05265 (AEI07_05285) | - | 998086..998847 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12138.20 Da Isoelectric Point: 7.0039
>NTDB_id=152911 AEI07_RS05230 WP_002877750.1 993958..994260(+) (ctsT) [Campylobacter jejuni strain CJ512CC45]
MKKAFILIESISAITIISLIFIGIFYHYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFINDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYHYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFINDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=152911 AEI07_RS05230 WP_002877750.1 993958..994260(+) (ctsT) [Campylobacter jejuni strain CJ512CC45]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATCA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTATTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGTGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATCA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTATTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGTGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |