Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   AEI25_RS02240 Genome accession   NZ_CP012242
Coordinates   423351..424001 (-) Length   216 a.a.
NCBI ID   WP_260628265.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CJ055CCUA     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 418351..429001
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI25_RS02205 (AEI25_02225) - 418728..419732 (+) 1005 WP_079756561.1 hypothetical protein -
  AEI25_RS02210 (AEI25_02230) tlyA 419729..420490 (+) 762 WP_002931934.1 TlyA family RNA methyltransferase -
  AEI25_RS02215 (AEI25_02235) ribF 420456..421310 (+) 855 WP_002931935.1 bifunctional riboflavin kinase/FAD synthetase -
  AEI25_RS02220 (AEI25_02240) cmoA 421297..422007 (+) 711 WP_072225838.1 carboxy-S-adenosyl-L-methionine synthase CmoA -
  AEI25_RS02225 (AEI25_02245) - 421997..422218 (-) 222 WP_072225837.1 EexN family lipoprotein -
  AEI25_RS02230 (AEI25_02250) - 422209..422649 (-) 441 WP_260628264.1 EexN family lipoprotein -
  AEI25_RS02235 (AEI25_02255) - 422708..423340 (-) 633 WP_002861298.1 trimeric intracellular cation channel family protein -
  AEI25_RS02240 (AEI25_02260) CJE0566 423351..424001 (-) 651 WP_260628265.1 DNA/RNA non-specific endonuclease Regulator
  AEI25_RS02245 (AEI25_02265) nth 423998..424624 (-) 627 WP_002931938.1 endonuclease III -
  AEI25_RS02250 (AEI25_02270) peb4 424705..425526 (+) 822 WP_002931939.1 peptidylprolyl isomerase PEB4 -
  AEI25_RS02255 (AEI25_02275) fbaA 425526..426590 (+) 1065 WP_260628267.1 class II fructose-bisphosphate aldolase -
  AEI25_RS02260 (AEI25_02280) - 426685..428127 (+) 1443 WP_126219551.1 MotA/TolQ/ExbB proton channel family protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 25480.25 Da        Isoelectric Point: 9.8264

>NTDB_id=152883 AEI25_RS02240 WP_260628265.1 423351..424001(-) (CJE0566) [Campylobacter jejuni strain CJ055CCUA]
MKIFIFLLAIFLNIFALESYKPSAVFSSYFNNINCSQILDKFFYLNCYDYKLKGTKAVAYKVEASNLKNKQIKKRPRFED
DTNIPKKYRTTWSDYKNSSYTRGHTASNASFSFSKAAQNSVFLMSNITPQNAQINNIIWNEIEQRERNLALKFQSIEVLN
LVLYDKEPQYIKNRIAIPSFYVKIIKTPKFKECYQVPNHEVNDENIKQYQINCDKF

Nucleotide


Download         Length: 651 bp        

>NTDB_id=152883 AEI25_RS02240 WP_260628265.1 423351..424001(-) (CJE0566) [Campylobacter jejuni strain CJ055CCUA]
ATGAAAATTTTCATCTTTTTACTCGCTATATTTCTTAATATTTTCGCCTTAGAATCTTACAAGCCTAGTGCTGTTTTTTC
TTCTTATTTTAACAACATAAATTGCTCACAAATCTTAGATAAGTTTTTTTATCTAAATTGCTATGATTATAAACTCAAAG
GTACAAAAGCCGTTGCTTATAAAGTAGAAGCTTCAAATTTAAAAAATAAACAAATTAAAAAACGTCCTCGCTTTGAAGAT
GATACAAATATTCCTAAAAAATACCGCACTACTTGGAGTGATTATAAAAACAGCAGCTACACGCGAGGACACACTGCATC
CAATGCTTCTTTTAGCTTTAGTAAAGCTGCCCAAAATTCAGTATTTTTAATGAGTAATATTACCCCACAAAATGCGCAAA
TAAATAATATAATTTGGAATGAAATCGAACAAAGAGAAAGAAATTTGGCTTTAAAATTTCAAAGTATTGAAGTTTTAAAT
TTAGTACTTTACGATAAAGAACCACAATACATTAAAAACCGTATTGCTATACCAAGTTTTTATGTAAAAATTATTAAAAC
TCCGAAATTTAAAGAATGCTATCAAGTACCAAACCACGAAGTAAATGATGAAAATATTAAACAGTATCAAATAAATTGTG
ATAAATTTTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(23-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

71.066

91.204

0.648
  CJE1441 Campylobacter jejuni RM1221

70.051

91.204

0.639

Multiple sequence alignment