Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   AEI14_RS02375 Genome accession   NZ_CP012241
Coordinates   425983..426645 (-) Length   220 a.a.
NCBI ID   WP_002929397.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CJ065CC48     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 415381..445057 425983..426645 within 0


Gene organization within MGE regions


Location: 415381..445057
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI14_RS02270 (AEI14_02285) - 415381..416583 (+) 1203 WP_002929369.1 tyrosine-type recombinase/integrase -
  AEI14_RS02275 (AEI14_02290) - 416580..416750 (-) 171 WP_002871200.1 helix-turn-helix transcriptional regulator -
  AEI14_RS02280 (AEI14_02295) - 416743..417285 (-) 543 WP_002827649.1 pentapeptide repeat-containing protein -
  AEI14_RS02285 (AEI14_02300) - 417432..418079 (-) 648 WP_002929372.1 hypothetical protein -
  AEI14_RS02290 (AEI14_02305) - 418085..418435 (-) 351 WP_002875041.1 hypothetical protein -
  AEI14_RS02295 (AEI14_02310) - 418432..418704 (-) 273 WP_002875042.1 hypothetical protein -
  AEI14_RS02300 (AEI14_02315) - 418709..419128 (-) 420 WP_002929374.1 YopX family protein -
  AEI14_RS02305 (AEI14_02320) - 419109..419387 (-) 279 WP_002929377.1 hypothetical protein -
  AEI14_RS02310 (AEI14_02325) - 419368..420063 (-) 696 WP_002929378.1 hypothetical protein -
  AEI14_RS02315 (AEI14_02330) - 420063..420797 (-) 735 WP_002929379.1 hypothetical protein -
  AEI14_RS02320 (AEI14_02335) - 420799..421653 (-) 855 WP_002929380.1 lambda-exonuclease family protein -
  AEI14_RS02325 (AEI14_02340) - 421643..422386 (-) 744 WP_004314296.1 phage regulatory protein/antirepressor Ant -
  AEI14_RS02330 (AEI14_02345) - 422383..422565 (-) 183 WP_002795990.1 hypothetical protein -
  AEI14_RS02335 (AEI14_02350) - 422708..422905 (+) 198 WP_002810107.1 hypothetical protein -
  AEI14_RS02340 - 422898..423050 (-) 153 WP_002871210.1 hypothetical protein -
  AEI14_RS02345 (AEI14_02355) - 423047..423301 (-) 255 WP_002795984.1 hypothetical protein -
  AEI14_RS02350 (AEI14_02360) - 423292..423561 (-) 270 WP_002875049.1 hypothetical protein -
  AEI14_RS02355 (AEI14_02365) - 423919..424191 (-) 273 WP_002875050.1 hypothetical protein -
  AEI14_RS02360 (AEI14_02370) - 424370..425140 (+) 771 WP_002929394.1 SEL1-like repeat protein -
  AEI14_RS02365 (AEI14_02375) - 425152..425427 (-) 276 WP_002840259.1 hypothetical protein -
  AEI14_RS02370 (AEI14_02380) - 425414..425917 (-) 504 WP_002923453.1 Panacea domain-containing protein -
  AEI14_RS02375 (AEI14_02385) CJE0566 425983..426645 (-) 663 WP_002929397.1 DNA/RNA non-specific endonuclease Regulator
  AEI14_RS02380 (AEI14_02390) - 426665..427438 (-) 774 WP_002929400.1 hypothetical protein -
  AEI14_RS02385 (AEI14_02395) - 427435..428166 (-) 732 WP_002929403.1 helix-turn-helix transcriptional regulator -
  AEI14_RS02390 (AEI14_02400) - 428307..428522 (+) 216 WP_002925661.1 hypothetical protein -
  AEI14_RS02395 (AEI14_02405) - 428675..429040 (-) 366 WP_002874369.1 hypothetical protein -
  AEI14_RS02400 (AEI14_02410) - 429083..430084 (+) 1002 WP_002929405.1 hypothetical protein -
  AEI14_RS02405 (AEI14_02415) - 430095..430745 (+) 651 WP_002924555.1 hypothetical protein -
  AEI14_RS02410 (AEI14_02420) - 430763..431143 (+) 381 WP_002865488.1 hypothetical protein -
  AEI14_RS02415 (AEI14_02425) - 431143..431529 (+) 387 WP_002861661.1 terminase small subunit -
  AEI14_RS02420 (AEI14_02430) - 431526..432818 (+) 1293 WP_002865490.1 hypothetical protein -
  AEI14_RS02425 (AEI14_02435) - 432808..433080 (+) 273 WP_002924542.1 hypothetical protein -
  AEI14_RS02430 (AEI14_02440) - 433061..434599 (+) 1539 WP_002826750.1 hypothetical protein -
  AEI14_RS02435 (AEI14_02445) - 434592..434795 (+) 204 WP_000931940.1 hypothetical protein -
  AEI14_RS02440 (AEI14_02450) - 434785..435432 (+) 648 WP_002865492.1 hypothetical protein -
  AEI14_RS02445 (AEI14_02455) - 435443..435823 (+) 381 WP_002865493.1 hypothetical protein -
  AEI14_RS02450 (AEI14_02460) - 436088..437227 (+) 1140 WP_002929415.1 hypothetical protein -
  AEI14_RS02455 (AEI14_02465) - 437227..440928 (+) 3702 WP_002924536.1 PBECR2 nuclease fold domain-containing protein -
  AEI14_RS02460 (AEI14_02470) - 441418..441645 (+) 228 WP_002865775.1 hypothetical protein -
  AEI14_RS02465 (AEI14_02475) - 441638..442108 (+) 471 WP_002865774.1 hypothetical protein -
  AEI14_RS02470 (AEI14_02480) - 442336..443127 (-) 792 WP_002924533.1 hypothetical protein -
  AEI14_RS02475 (AEI14_02485) - 443277..443945 (+) 669 WP_002865349.1 Rha family transcriptional regulator -
  AEI14_RS02480 (AEI14_02490) - 444023..445057 (+) 1035 WP_002924529.1 DUF5309 family protein -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 25816.32 Da        Isoelectric Point: 9.9096

>NTDB_id=152856 AEI14_RS02375 WP_002929397.1 425983..426645(-) (CJE0566) [Campylobacter jejuni strain CJ065CC48]
MKKLILLPLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYKLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVASKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYTKILKGENFKECYQVPNHKVENENIKNYKVNCDILTGS

Nucleotide


Download         Length: 663 bp        

>NTDB_id=152856 AEI14_RS02375 WP_002929397.1 425983..426645(-) (CJE0566) [Campylobacter jejuni strain CJ065CC48]
GTGAAAAAACTCATACTTTTGCCATTGTTATCCACTCTAGCTTTTGCTGATTACACACAATATAAACCGAGTGAAGATTT
TGCAAAGTATTTTACTAAACAAAACTGCTCTCAAGTTTTAGATAAGTTTTATTATCTAAATTGTTATGATTATAATTATA
AAGGCACTAAAGCTGTAGCTTATAAATTAGAAGCGGAAAATTTAAAAGGCGAACAAATTAAAAAACGCCCACGATTTGAA
GATGATACAAATATCCCTAAAAAATATCGCACCACTTGGAGTGATTATAAAAATAGTGGTTATGATAGAGGACACACTCT
TTCTAATGCCTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACATTCTTAATGAGTAATATTACTCCACAAAATCCAC
AAATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTCAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAATAATCCACAAAGAATAAGAAATCAAATTGCCATTCCAAGCTCTTACACTAAGATTTTAAA
AGGCGAGAATTTTAAAGAATGTTATCAAGTGCCAAATCATAAAGTAGAAAATGAGAATATAAAAAATTATAAGGTTAATT
GTGATATTTTAACCGGCAGTTGA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(27-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

94.419

97.727

0.923
  CJE1441 Campylobacter jejuni RM1221

92.558

97.727

0.905

Multiple sequence alignment