Detailed information    

insolico Bioinformatically predicted

Overview


Name   CJE0566   Type   Regulator
Locus tag   AEH97_RS02210 Genome accession   NZ_CP012222
Coordinates   400927..401589 (-) Length   220 a.a.
NCBI ID   WP_002929397.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CJ007CC45     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 395927..406589
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEH97_RS02165 (AEH97_02205) - 396178..396912 (-) 735 WP_002929379.1 hypothetical protein -
  AEH97_RS02170 (AEH97_02210) - 396914..397768 (-) 855 WP_022552237.1 lambda-exonuclease family protein -
  AEH97_RS02175 (AEH97_02215) - 397770..397997 (-) 228 WP_002874355.1 helix-turn-helix domain-containing protein -
  AEH97_RS02180 (AEH97_02220) - 397988..398245 (-) 258 WP_002865124.1 hypothetical protein -
  AEH97_RS02185 (AEH97_02225) - 398236..398505 (-) 270 WP_022552238.1 hypothetical protein -
  AEH97_RS02190 (AEH97_02230) - 398862..399134 (-) 273 WP_022552239.1 hypothetical protein -
  AEH97_RS02195 (AEH97_02235) - 399314..400084 (+) 771 WP_041176843.1 SEL1-like repeat protein -
  AEH97_RS02200 (AEH97_02240) - 400096..400371 (-) 276 WP_002840259.1 hypothetical protein -
  AEH97_RS02205 (AEH97_02245) - 400358..400861 (-) 504 WP_002923453.1 Panacea domain-containing protein -
  AEH97_RS02210 (AEH97_02250) CJE0566 400927..401589 (-) 663 WP_002929397.1 DNA/RNA non-specific endonuclease Regulator
  AEH97_RS02215 (AEH97_02255) - 401609..402382 (-) 774 WP_002929400.1 hypothetical protein -
  AEH97_RS02220 (AEH97_02260) - 402379..403113 (-) 735 WP_022552241.1 helix-turn-helix transcriptional regulator -
  AEH97_RS02225 - 403225..403449 (+) 225 WP_011049708.1 hypothetical protein -
  AEH97_RS02230 (AEH97_02265) - 403605..403970 (-) 366 WP_002902043.1 hypothetical protein -
  AEH97_RS02235 (AEH97_02270) - 404013..405014 (+) 1002 WP_022552242.1 hypothetical protein -
  AEH97_RS02240 (AEH97_02275) - 405025..405675 (+) 651 WP_002871222.1 hypothetical protein -
  AEH97_RS02245 (AEH97_02280) - 405693..406073 (+) 381 WP_002788333.1 hypothetical protein -
  AEH97_RS02250 (AEH97_02285) - 406073..406459 (+) 387 WP_002861661.1 terminase small subunit -

Sequence


Protein


Download         Length: 220 a.a.        Molecular weight: 25816.32 Da        Isoelectric Point: 9.9096

>NTDB_id=152532 AEH97_RS02210 WP_002929397.1 400927..401589(-) (CJE0566) [Campylobacter jejuni strain CJ007CC45]
MKKLILLPLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYKLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVASKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYTKILKGENFKECYQVPNHKVENENIKNYKVNCDILTGS

Nucleotide


Download         Length: 663 bp        

>NTDB_id=152532 AEH97_RS02210 WP_002929397.1 400927..401589(-) (CJE0566) [Campylobacter jejuni strain CJ007CC45]
GTGAAAAAACTCATACTTTTGCCATTGTTATCCACTCTAGCTTTTGCTGATTACACACAATATAAACCGAGTGAAGATTT
TGCAAAGTATTTTACTAAACAAAACTGCTCTCAAGTTTTAGATAAGTTTTATTATCTAAATTGTTATGATTATAATTATA
AAGGCACTAAAGCTGTAGCTTATAAATTAGAAGCGGAAAATTTAAAAGGCGAACAAATTAAAAAACGCCCACGATTTGAA
GATGATACAAATATCCCTAAAAAATATCGCACCACTTGGAGTGATTATAAAAATAGTGGTTATGATAGAGGACACACTCT
TTCTAATGCCTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACATTCTTAATGAGTAATATTACTCCACAAAATCCAC
AAATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTCAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAATAATCCACAAAGAATAAGAAATCAAATTGCCATTCCAAGCTCTTACACTAAGATTTTAAA
AGGCGAGAATTTTAAAGAATGTTATCAAGTGCCAAATCATAAAGTAGAAAATGAGAATATAAAAAATTATAAGGTTAATT
GTGATATTTTAACCGGCAGTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

94.419

97.727

0.923

  CJE1441 Campylobacter jejuni RM1221

92.558

97.727

0.905


Multiple sequence alignment