Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AEI23_RS05980 | Genome accession | NZ_CP012221 |
| Coordinates | 1096225..1096527 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain CJ018CCUA | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1091225..1101527
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI23_RS05955 (AEI23_05980) | rpsR | 1091589..1091849 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| AEI23_RS05960 (AEI23_05985) | lon | 1091908..1094283 (-) | 2376 | WP_002878791.1 | endopeptidase La | - |
| AEI23_RS05965 (AEI23_05990) | - | 1094300..1094947 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| AEI23_RS05970 (AEI23_05995) | fliW | 1095108..1095497 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| AEI23_RS05975 (AEI23_06000) | proC | 1095497..1096228 (+) | 732 | WP_002873292.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AEI23_RS05980 (AEI23_06005) | ctsT | 1096225..1096527 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| AEI23_RS05985 (AEI23_06010) | - | 1096524..1097186 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| AEI23_RS05990 (AEI23_06015) | - | 1097183..1097635 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| AEI23_RS05995 (AEI23_06020) | hemD | 1097632..1098261 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| AEI23_RS06000 (AEI23_06025) | thiE | 1098239..1098871 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| AEI23_RS06005 (AEI23_06030) | thiD | 1098861..1099673 (-) | 813 | WP_002873290.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AEI23_RS06010 (AEI23_06035) | - | 1099670..1100356 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| AEI23_RS06015 (AEI23_06040) | - | 1100353..1101114 (-) | 762 | WP_052786489.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=152509 AEI23_RS05980 WP_002853046.1 1096225..1096527(+) (ctsT) [Campylobacter jejuni strain CJ018CCUA]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=152509 AEI23_RS05980 WP_002853046.1 1096225..1096527(+) (ctsT) [Campylobacter jejuni strain CJ018CCUA]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |