Detailed information
Bioinformatically predicted
Overview
| Name | proC | Type | Machinery gene |
| Locus tag | AEI23_RS05975 | Genome accession | NZ_CP012221 |
| Coordinates | 1095497..1096228 (+) | Length | 243 a.a. |
| NCBI ID | WP_002873292.1 | Uniprot ID | A0AAX2LXC4 |
| Organism | Campylobacter jejuni strain CJ018CCUA | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1052527..1094947 | 1095497..1096228 | flank | 550 |
Gene organization within MGE regions
Location: 1052527..1096228
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI23_RS05645 (AEI23_05670) | - | 1052527..1053615 (+) | 1089 | WP_052786483.1 | CinA family protein | - |
| AEI23_RS05650 (AEI23_05675) | - | 1053627..1054053 (+) | 427 | Protein_1106 | GNAT family N-acetyltransferase | - |
| AEI23_RS05655 (AEI23_05680) | - | 1054117..1054568 (+) | 452 | Protein_1107 | nitroreductase family protein | - |
| AEI23_RS05660 (AEI23_05685) | rdxA | 1054568..1055173 (+) | 606 | WP_052786485.1 | NAD(P)H-dependent oxidoreductase | - |
| AEI23_RS05665 (AEI23_05690) | - | 1055381..1056184 (-) | 804 | WP_002870227.1 | S24 family peptidase | - |
| AEI23_RS05670 (AEI23_05695) | - | 1056283..1056552 (+) | 270 | WP_002876361.1 | hypothetical protein | - |
| AEI23_RS05675 (AEI23_05700) | - | 1056568..1056759 (+) | 192 | WP_002870225.1 | hypothetical protein | - |
| AEI23_RS05680 (AEI23_05705) | - | 1056760..1058874 (+) | 2115 | WP_115766822.1 | Mu transposase C-terminal domain-containing protein | - |
| AEI23_RS05685 (AEI23_05710) | - | 1058963..1059820 (+) | 858 | WP_052784313.1 | AAA family ATPase | - |
| AEI23_RS05690 (AEI23_05715) | - | 1059817..1060008 (+) | 192 | WP_069360446.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| AEI23_RS05695 (AEI23_05720) | - | 1060005..1060190 (+) | 186 | WP_002824157.1 | hypothetical protein | - |
| AEI23_RS05700 (AEI23_05725) | - | 1060246..1060677 (+) | 432 | WP_002865075.1 | SA1788 family PVL leukocidin-associated protein | - |
| AEI23_RS05705 (AEI23_05730) | - | 1060751..1061089 (+) | 339 | WP_043020465.1 | DUF4406 domain-containing protein | - |
| AEI23_RS05715 (AEI23_05740) | - | 1061285..1061770 (+) | 486 | WP_002806832.1 | host-nuclease inhibitor Gam family protein | - |
| AEI23_RS05720 (AEI23_05745) | - | 1061767..1061946 (+) | 180 | WP_002791416.1 | hypothetical protein | - |
| AEI23_RS05725 (AEI23_05750) | - | 1062010..1062282 (+) | 273 | WP_002791414.1 | hypothetical protein | - |
| AEI23_RS05730 (AEI23_05755) | - | 1062279..1062665 (+) | 387 | WP_002791413.1 | YopX family protein | - |
| AEI23_RS05735 (AEI23_05760) | - | 1062780..1062959 (+) | 180 | WP_002864977.1 | hypothetical protein | - |
| AEI23_RS05740 (AEI23_05765) | - | 1062956..1063384 (+) | 429 | WP_002790255.1 | hypothetical protein | - |
| AEI23_RS05745 (AEI23_05770) | - | 1063436..1063627 (+) | 192 | WP_002918730.1 | hypothetical protein | - |
| AEI23_RS05750 (AEI23_05775) | - | 1063614..1064093 (+) | 480 | WP_002918728.1 | phage virion morphogenesis protein | - |
| AEI23_RS05755 (AEI23_05780) | - | 1064232..1065365 (-) | 1134 | WP_002870187.1 | phage minor head protein | - |
| AEI23_RS05760 (AEI23_05785) | - | 1065358..1066740 (-) | 1383 | WP_002870186.1 | DUF935 family protein | - |
| AEI23_RS05765 (AEI23_05790) | terL | 1066737..1068263 (-) | 1527 | WP_002865465.1 | phage terminase large subunit | - |
| AEI23_RS05770 (AEI23_05795) | - | 1068353..1068667 (-) | 315 | WP_002790261.1 | phage holin family protein | - |
| AEI23_RS05775 (AEI23_05800) | - | 1068779..1069027 (-) | 249 | WP_002784496.1 | hypothetical protein | - |
| AEI23_RS05780 (AEI23_05805) | - | 1069024..1069365 (-) | 342 | WP_002854893.1 | hypothetical protein | - |
| AEI23_RS05785 (AEI23_05810) | - | 1069376..1069765 (-) | 390 | WP_002870185.1 | D-Ala-D-Ala carboxypeptidase family metallohydrolase | - |
| AEI23_RS05790 (AEI23_05815) | - | 1069755..1070120 (-) | 366 | WP_002790266.1 | hypothetical protein | - |
| AEI23_RS05795 (AEI23_05820) | - | 1070117..1070470 (-) | 354 | WP_002790896.1 | hypothetical protein | - |
| AEI23_RS05800 (AEI23_05825) | - | 1070467..1070694 (-) | 228 | WP_002875630.1 | hypothetical protein | - |
| AEI23_RS05805 (AEI23_05830) | - | 1070694..1071581 (-) | 888 | WP_002790002.1 | Mu-like prophage major head subunit gpT family protein | - |
| AEI23_RS05810 (AEI23_05835) | - | 1071581..1072621 (-) | 1041 | WP_052802992.1 | phage protease | - |
| AEI23_RS05815 (AEI23_05840) | - | 1072752..1073216 (+) | 465 | WP_002865847.1 | DUF1804 family protein | - |
| AEI23_RS05820 (AEI23_05845) | - | 1073213..1073845 (+) | 633 | WP_002795236.1 | phage baseplate assembly protein V | - |
| AEI23_RS05825 (AEI23_05850) | - | 1073854..1074045 (+) | 192 | WP_002873733.1 | hypothetical protein | - |
| AEI23_RS05830 (AEI23_05855) | - | 1074042..1074332 (+) | 291 | WP_002795239.1 | GPW/gp25 family protein | - |
| AEI23_RS05835 (AEI23_05860) | - | 1074329..1075495 (+) | 1167 | WP_115766823.1 | baseplate J/gp47 family protein | - |
| AEI23_RS05840 (AEI23_05865) | - | 1075593..1076213 (+) | 621 | WP_002864870.1 | phage tail protein I | - |
| AEI23_RS05845 (AEI23_05870) | - | 1076213..1077292 (+) | 1080 | WP_002903449.1 | phage tail protein | - |
| AEI23_RS05850 (AEI23_05875) | - | 1077302..1077808 (+) | 507 | WP_002903450.1 | DUF4376 domain-containing protein | - |
| AEI23_RS05855 (AEI23_05880) | - | 1077805..1078176 (+) | 372 | WP_061563589.1 | DUF1353 domain-containing protein | - |
| AEI23_RS05860 (AEI23_05885) | - | 1078277..1079290 (+) | 1014 | WP_115766824.1 | hypothetical protein | - |
| AEI23_RS05865 (AEI23_05890) | - | 1079309..1080499 (+) | 1191 | WP_115766825.1 | phage tail sheath family protein | - |
| AEI23_RS05870 (AEI23_05895) | - | 1080622..1081137 (+) | 516 | WP_002865794.1 | phage major tail tube protein | - |
| AEI23_RS05875 (AEI23_05900) | - | 1081148..1081384 (+) | 237 | WP_002789979.1 | phage tail assembly protein | - |
| AEI23_RS09825 | - | 1081368..1081505 (+) | 138 | WP_002865793.1 | hypothetical protein | - |
| AEI23_RS05880 (AEI23_05905) | - | 1081492..1081722 (-) | 231 | WP_002870149.1 | hypothetical protein | - |
| AEI23_RS05885 (AEI23_05910) | - | 1081752..1083716 (+) | 1965 | WP_002876455.1 | phage tail tape measure protein | - |
| AEI23_RS05890 (AEI23_05915) | - | 1083718..1084092 (+) | 375 | WP_002789966.1 | phage tail protein | - |
| AEI23_RS05895 (AEI23_05920) | - | 1084085..1084276 (+) | 192 | WP_002789964.1 | tail protein X | - |
| AEI23_RS05900 (AEI23_05925) | - | 1084270..1085238 (+) | 969 | WP_002865687.1 | phage tail protein | - |
| AEI23_RS05905 (AEI23_05930) | - | 1085340..1086155 (+) | 816 | WP_002888079.1 | DNA adenine methylase | - |
| AEI23_RS05910 (AEI23_05935) | - | 1086185..1086472 (-) | 288 | WP_002865266.1 | hypothetical protein | - |
| AEI23_RS05915 (AEI23_05940) | - | 1086552..1086746 (-) | 195 | WP_002843339.1 | hypothetical protein | - |
| AEI23_RS05920 (AEI23_05945) | - | 1086756..1087076 (-) | 321 | WP_002865000.1 | hypothetical protein | - |
| AEI23_RS05925 (AEI23_05950) | - | 1087157..1087786 (-) | 630 | WP_115766826.1 | LexA family transcriptional regulator | - |
| AEI23_RS05930 (AEI23_05955) | pgsA | 1088072..1088608 (+) | 537 | WP_052786486.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| AEI23_RS05935 (AEI23_05960) | rseP | 1088605..1089711 (+) | 1107 | WP_052786487.1 | RIP metalloprotease RseP | - |
| AEI23_RS05940 (AEI23_05965) | - | 1089704..1090554 (+) | 851 | Protein_1164 | VirK family antimicrobial peptide resistance protein | - |
| AEI23_RS05945 (AEI23_05970) | rpsF | 1090641..1091018 (+) | 378 | WP_002812868.1 | 30S ribosomal protein S6 | - |
| AEI23_RS05950 (AEI23_05975) | ssb | 1091027..1091578 (+) | 552 | WP_002856575.1 | single-stranded DNA-binding protein | - |
| AEI23_RS05955 (AEI23_05980) | rpsR | 1091589..1091849 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| AEI23_RS05960 (AEI23_05985) | lon | 1091908..1094283 (-) | 2376 | WP_002878791.1 | endopeptidase La | - |
| AEI23_RS05965 (AEI23_05990) | - | 1094300..1094947 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| AEI23_RS05970 (AEI23_05995) | fliW | 1095108..1095497 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| AEI23_RS05975 (AEI23_06000) | proC | 1095497..1096228 (+) | 732 | WP_002873292.1 | pyrroline-5-carboxylate reductase | Machinery gene |
Sequence
Protein
Download Length: 243 a.a. Molecular weight: 26608.01 Da Isoelectric Point: 8.5934
>NTDB_id=152508 AEI23_RS05975 WP_002873292.1 1095497..1096228(+) (proC) [Campylobacter jejuni strain CJ018CCUA]
MLYILANGSMATALAYGLKDDYEICIVGRSIEKLQALTKEGFKTLLYKDFNIEGKDVILAFKPYALENIAQMLKGQARIL
ISVLANVDFEKLQTIKAQNYVRIMPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSSALLEHEHPAIIKENICSPGGVTIKGIKILEQKGIRGSFFEAINAS
SAK
MLYILANGSMATALAYGLKDDYEICIVGRSIEKLQALTKEGFKTLLYKDFNIEGKDVILAFKPYALENIAQMLKGQARIL
ISVLANVDFEKLQTIKAQNYVRIMPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSSALLEHEHPAIIKENICSPGGVTIKGIKILEQKGIRGSFFEAINAS
SAK
Nucleotide
Download Length: 732 bp
>NTDB_id=152508 AEI23_RS05975 WP_002873292.1 1095497..1096228(+) (proC) [Campylobacter jejuni strain CJ018CCUA]
ATGCTCTATATACTTGCAAATGGATCTATGGCAACAGCCTTAGCCTATGGATTAAAAGATGATTATGAAATTTGTATAGT
AGGAAGAAGTATAGAAAAACTTCAAGCCCTCACCAAAGAAGGCTTTAAAACCTTACTTTACAAAGATTTTAACATAGAAG
GTAAAGATGTTATTTTGGCTTTCAAACCTTATGCTTTAGAAAATATTGCCCAAATGCTAAAAGGACAAGCACGCATCTTA
ATCTCTGTTTTAGCCAATGTTGATTTTGAAAAACTACAAACCATCAAAGCTCAAAATTATGTTAGAATAATGCCTAATAC
AGCAGCTAAATACAAGGCTTCAACCACACCATATATACTTAAAAACTCTCATTTTGAAAATGAAATTTTAGACATTTTAA
AAACTTTTGGCTCGGCTTATAAATTAGATAATGAAATACAAATGAATGCAGCTATGGCGATTAGCGGCTGCGCTCCTGCT
TTTTTAGCACTTATAGCAGAAAGCATTGCTAATGCTGGAGTTTATGAAGGTTTGTCAAAAGAACTTAGTCTCAATCTTAC
GCGCTCTTTATTTAAAAGCTCTAGTGCTTTACTAGAACATGAACATCCAGCTATTATCAAAGAAAATATTTGCTCCCCTG
GCGGAGTTACAATAAAAGGCATAAAAATACTCGAACAAAAAGGAATTCGCGGAAGTTTTTTTGAAGCCATAAATGCTAGC
AGCGCTAAATGA
ATGCTCTATATACTTGCAAATGGATCTATGGCAACAGCCTTAGCCTATGGATTAAAAGATGATTATGAAATTTGTATAGT
AGGAAGAAGTATAGAAAAACTTCAAGCCCTCACCAAAGAAGGCTTTAAAACCTTACTTTACAAAGATTTTAACATAGAAG
GTAAAGATGTTATTTTGGCTTTCAAACCTTATGCTTTAGAAAATATTGCCCAAATGCTAAAAGGACAAGCACGCATCTTA
ATCTCTGTTTTAGCCAATGTTGATTTTGAAAAACTACAAACCATCAAAGCTCAAAATTATGTTAGAATAATGCCTAATAC
AGCAGCTAAATACAAGGCTTCAACCACACCATATATACTTAAAAACTCTCATTTTGAAAATGAAATTTTAGACATTTTAA
AAACTTTTGGCTCGGCTTATAAATTAGATAATGAAATACAAATGAATGCAGCTATGGCGATTAGCGGCTGCGCTCCTGCT
TTTTTAGCACTTATAGCAGAAAGCATTGCTAATGCTGGAGTTTATGAAGGTTTGTCAAAAGAACTTAGTCTCAATCTTAC
GCGCTCTTTATTTAAAAGCTCTAGTGCTTTACTAGAACATGAACATCCAGCTATTATCAAAGAAAATATTTGCTCCCCTG
GCGGAGTTACAATAAAAGGCATAAAAATACTCGAACAAAAAGGAATTCGCGGAAGTTTTTTTGAAGCCATAAATGCTAGC
AGCGCTAAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| proC | Campylobacter jejuni subsp. jejuni 81-176 |
98.765 |
100 |
0.988 |