Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AEI22_RS04850 | Genome accession | NZ_CP012220 |
| Coordinates | 921867..922169 (+) | Length | 100 a.a. |
| NCBI ID | WP_002936694.1 | Uniprot ID | A0A5T1QQE6 |
| Organism | Campylobacter jejuni strain CJ090CC1332 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 916867..927169
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI22_RS04825 (AEI22_04815) | rpsR | 917229..917489 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| AEI22_RS04830 (AEI22_04820) | lon | 917550..919925 (-) | 2376 | WP_052779714.1 | endopeptidase La | - |
| AEI22_RS04835 (AEI22_04825) | - | 919942..920589 (-) | 648 | WP_002936691.1 | outer membrane protein assembly factor BamD | - |
| AEI22_RS04840 (AEI22_04830) | fliW | 920750..921139 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| AEI22_RS04845 (AEI22_04835) | proC | 921139..921870 (+) | 732 | WP_052779713.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AEI22_RS04850 (AEI22_04840) | ctsT | 921867..922169 (+) | 303 | WP_002936694.1 | type II secretion system protein | Machinery gene |
| AEI22_RS04855 (AEI22_04845) | - | 922166..922828 (+) | 663 | WP_002936695.1 | hypothetical protein | - |
| AEI22_RS04860 (AEI22_04850) | - | 922825..923277 (+) | 453 | WP_052817076.1 | hypothetical protein | - |
| AEI22_RS04865 (AEI22_04855) | hemD | 923274..923903 (-) | 630 | WP_020247026.1 | uroporphyrinogen-III synthase | - |
| AEI22_RS04870 (AEI22_04860) | thiE | 923881..924513 (-) | 633 | WP_052779711.1 | thiamine phosphate synthase | - |
| AEI22_RS04875 (AEI22_04865) | thiD | 924503..925315 (-) | 813 | WP_052779729.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AEI22_RS04880 (AEI22_04870) | - | 925312..925998 (-) | 687 | WP_052779710.1 | endonuclease III domain-containing protein | - |
| AEI22_RS04885 (AEI22_04875) | - | 925995..926756 (-) | 762 | WP_052779709.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12116.19 Da Isoelectric Point: 6.2957
>NTDB_id=152483 AEI22_RS04850 WP_002936694.1 921867..922169(+) (ctsT) [Campylobacter jejuni strain CJ090CC1332]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYLQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYLQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=152483 AEI22_RS04850 WP_002936694.1 921867..922169(+) (ctsT) [Campylobacter jejuni strain CJ090CC1332]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACCTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACCTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACCTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACCTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |