Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   AEI22_RS02615 Genome accession   NZ_CP012220
Coordinates   484419..485069 (-) Length   216 a.a.
NCBI ID   WP_115794442.1    Uniprot ID   A0A5T0XY51
Organism   Campylobacter jejuni strain CJ090CC1332     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 479419..490069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI22_RS02580 (AEI22_02600) - 479808..480812 (+) 1005 WP_079263945.1 hypothetical protein -
  AEI22_RS02585 (AEI22_02605) tlyA 480809..481570 (+) 762 WP_052801764.1 TlyA family RNA methyltransferase -
  AEI22_RS02590 (AEI22_02610) ribF 481536..482390 (+) 855 WP_052801763.1 bifunctional riboflavin kinase/FAD synthetase -
  AEI22_RS02595 (AEI22_02615) cmoA 482377..483087 (+) 711 WP_115794440.1 carboxy-S-adenosyl-L-methionine synthase CmoA -
  AEI22_RS02600 (AEI22_02620) - 483077..483292 (-) 216 WP_058000785.1 EexN family lipoprotein -
  AEI22_RS02605 (AEI22_02625) - 483289..483717 (-) 429 WP_044261251.1 EexN family lipoprotein -
  AEI22_RS02610 (AEI22_02630) - 483776..484408 (-) 633 WP_115794441.1 trimeric intracellular cation channel family protein -
  AEI22_RS02615 (AEI22_02635) CJE0566 484419..485069 (-) 651 WP_115794442.1 DNA/RNA non-specific endonuclease Regulator
  AEI22_RS02620 (AEI22_02640) nth 485066..485692 (-) 627 WP_002861300.1 endonuclease III -
  AEI22_RS02625 (AEI22_02645) peb4 485773..486594 (+) 822 WP_002852119.1 peptidylprolyl isomerase PEB4 -
  AEI22_RS02630 (AEI22_02650) fbaA 486594..487658 (+) 1065 WP_070306314.1 class II fructose-bisphosphate aldolase -
  AEI22_RS02635 (AEI22_02655) - 487753..489195 (+) 1443 WP_002852205.1 MotA/TolQ/ExbB proton channel family protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 25522.42 Da        Isoelectric Point: 9.8260

>NTDB_id=152478 AEI22_RS02615 WP_115794442.1 484419..485069(-) (CJE0566) [Campylobacter jejuni strain CJ090CC1332]
MKIFIFLLVISLNIFALEPYKPSADFSSYFNNINCSQILDKFFYLNCYDYKLKGTKAVAYKVEALNLKDKQIKKRPRFED
DANIPKKYRTTWSDYKNSGYTRGHTAPNASFSFSKAAQNSVFLMSNITPQIAQINNKIWNEIEQRERTLALKFQSIEVLN
LVLYDKEPRYIKNRIAIPSFYIKIIKTPKFKECYQVPNHEVNDENIRQYQINCDKF

Nucleotide


Download         Length: 651 bp        

>NTDB_id=152478 AEI22_RS02615 WP_115794442.1 484419..485069(-) (CJE0566) [Campylobacter jejuni strain CJ090CC1332]
ATGAAAATTTTCATCTTTTTACTCGTTATATCTCTTAATATTTTTGCCTTAGAACCTTACAAGCCTAGTGCTGATTTTTC
TTCTTATTTTAACAATATAAATTGCTCGCAAATCTTAGATAAGTTTTTTTATCTAAATTGCTATGATTACAAACTCAAAG
GTACAAAAGCTGTTGCTTATAAAGTAGAAGCTTTAAATTTAAAAGATAAGCAAATTAAAAAACGTCCACGCTTTGAAGAT
GATGCAAATATTCCTAAAAAATACCGCACTACTTGGAGTGATTATAAAAACAGTGGTTATACACGAGGACACACTGCACC
CAATGCTTCTTTTAGCTTTAGCAAGGCTGCTCAAAATTCAGTATTTTTAATGAGTAATATAACCCCACAAATTGCTCAAA
TAAATAATAAAATTTGGAATGAAATCGAGCAAAGAGAAAGAACTTTAGCTTTAAAATTTCAAAGCATCGAGGTTTTAAAT
TTGGTACTTTACGATAAAGAACCACGATACATTAAAAACCGTATTGCTATACCAAGTTTTTATATAAAAATTATTAAAAC
TCCTAAATTTAAAGAATGTTATCAAGTGCCAAACCATGAAGTAAATGATGAAAATATTAGGCAGTATCAAATAAATTGTG
ATAAATTTTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(34-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5T0XY51

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

70.558

91.204

0.644
  CJE1441 Campylobacter jejuni RM1221

69.543

91.204

0.634

Multiple sequence alignment