Detailed information    

insolico Bioinformatically predicted

Overview


Name   CJE0566   Type   Regulator
Locus tag   AEI26_RS04620 Genome accession   NZ_CP012212
Coordinates   876553..877206 (-) Length   217 a.a.
NCBI ID   WP_052796446.1    Uniprot ID   A0A5Y4YLG1
Organism   Campylobacter jejuni strain CJ017CCUA     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 871553..882206
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI26_RS04580 (AEI26_04530) - 871925..872779 (-) 855 WP_052791627.1 lambda-exonuclease family protein -
  AEI26_RS04585 (AEI26_04535) - 872781..873008 (-) 228 WP_038402062.1 helix-turn-helix domain-containing protein -
  AEI26_RS04590 (AEI26_04540) - 872999..873256 (-) 258 WP_115801356.1 hypothetical protein -
  AEI26_RS04595 (AEI26_04545) - 873247..873516 (-) 270 WP_002874357.1 hypothetical protein -
  AEI26_RS08975 - 873751..873921 (-) 171 WP_002871212.1 hypothetical protein -
  AEI26_RS04600 (AEI26_04550) - 874318..874590 (-) 273 WP_002875050.1 hypothetical protein -
  AEI26_RS09100 - 874906..875439 (+) 534 WP_251823125.1 hypothetical protein -
  AEI26_RS04610 (AEI26_04560) - 875662..875964 (-) 303 WP_070298483.1 hypothetical protein -
  AEI26_RS04615 (AEI26_04565) - 875961..876491 (-) 531 WP_186820468.1 hypothetical protein -
  AEI26_RS04620 (AEI26_04570) CJE0566 876553..877206 (-) 654 WP_052796446.1 DNA/RNA non-specific endonuclease Regulator
  AEI26_RS04625 (AEI26_04575) - 877206..877637 (-) 432 WP_070298484.1 protein-export chaperone SecB -
  AEI26_RS04630 (AEI26_04580) - 877653..878393 (-) 741 WP_162825498.1 hypothetical protein -
  AEI26_RS04635 (AEI26_04585) - 878432..878839 (-) 408 WP_052791611.1 hypothetical protein -
  AEI26_RS04640 (AEI26_04590) - 878836..879570 (-) 735 WP_115801358.1 S24 family peptidase -
  AEI26_RS04645 - 879682..879903 (+) 222 WP_079861400.1 hypothetical protein -
  AEI26_RS04650 - 879900..880193 (-) 294 WP_044794164.1 hypothetical protein -
  AEI26_RS04655 - 880330..880695 (-) 366 WP_057031284.1 hypothetical protein -
  AEI26_RS04660 (AEI26_04605) - 880738..881739 (+) 1002 WP_115801359.1 hypothetical protein -

Sequence


Protein


Download         Length: 217 a.a.        Molecular weight: 25564.09 Da        Isoelectric Point: 9.8338

>NTDB_id=152319 AEI26_RS04620 WP_052796446.1 876553..877206(-) (CJE0566) [Campylobacter jejuni strain CJ017CCUA]
MKKLILLPLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYKLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDSNPQRIRNQIAIPSSYTKILKGENFKECYQVPNHEVDDEGIKKYKVNCDKF

Nucleotide


Download         Length: 654 bp        

>NTDB_id=152319 AEI26_RS04620 WP_052796446.1 876553..877206(-) (CJE0566) [Campylobacter jejuni strain CJ017CCUA]
ATGAAAAAACTCATACTTTTACCATTGTTATCCACTCTAGCCTTTGCTGATTATACGCAATATAAACCAAGCGAAGATTT
TGCTAAGTATTTTACTAAGCAAAACTGCTCACAAGTTTTAGATAAGTTTTATTATCTAAATTGTTATGATTATAATTATA
AAGGCACTAAAGCTGTAGCTTATAAATTAGAAGCGGAAAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGATTTGAA
GATGATACAAATATCCCTAAAAAATATCGCACCACTTGGAGTGATTATAAAAATAGTGGTTATGATAGAGGACACACTCT
TTCTAATGCCTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACATTCTTAATGAGTAATATTACTCCACAAAATCCAC
AAATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAACTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAGTAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTACACTAAGATTTTAAA
AGGCGAGAATTTTAAAGAATGTTATCAAGTGCCAAACCATGAAGTGGATGACGAGGGTATAAAAAAATATAAGGTTAATT
GTGATAAATTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5Y4YLG1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

93.548

100

0.935

  CJE1441 Campylobacter jejuni RM1221

90.783

100

0.908


Multiple sequence alignment