Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   AEI02_RS06835 Genome accession   NZ_CP012206
Coordinates   1297802..1298317 (-) Length   171 a.a.
NCBI ID   WP_052825496.1    Uniprot ID   A0A5Y6THS6
Organism   Campylobacter jejuni strain CJ067CC45     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1292802..1303317
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI02_RS06820 (AEI02_06815) - 1292897..1294633 (-) 1737 WP_115784902.1 flagellin A -
  AEI02_RS06825 (AEI02_06820) - 1294717..1296543 (-) 1827 WP_052825494.1 motility associated factor glycosyltransferase family protein -
  AEI02_RS06830 (AEI02_06825) - 1296553..1297802 (-) 1250 Protein_1330 DUF2920 family protein -
  AEI02_RS06835 (AEI02_06830) ctsG 1297802..1298317 (-) 516 WP_052825496.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  AEI02_RS06840 (AEI02_06835) tsaD 1298318..1299325 (-) 1008 WP_052825497.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  AEI02_RS06845 (AEI02_06840) - 1299322..1300716 (-) 1395 WP_052825498.1 M99 family carboxypeptidase catalytic domain-containing protein -
  AEI02_RS06850 (AEI02_06845) dxr 1300718..1301788 (-) 1071 WP_052825499.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  AEI02_RS06855 (AEI02_06850) cdsA 1301785..1302510 (-) 726 WP_052825500.1 phosphatidate cytidylyltransferase -
  AEI02_RS06860 (AEI02_06855) - 1302521..1302859 (-) 339 WP_002855905.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18762.68 Da        Isoelectric Point: 6.4693

>NTDB_id=152247 AEI02_RS06835 WP_052825496.1 1297802..1298317(-) (ctsG) [Campylobacter jejuni strain CJ067CC45]
MRKAFTILELVFVIIILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGIENVDLSN
FNGIKEVNFRVGEDKECLKLVFINKADFILMGISSNEASKNAIINAANQTHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=152247 AEI02_RS06835 WP_052825496.1 1297802..1298317(-) (ctsG) [Campylobacter jejuni strain CJ067CC45]
ATGAGAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCATTATTTTAGGAATTTTAGCTGCTATTGCTTTACCAAA
AATGAGTTCAAGCAAGGATGAAGCTGAAGTTAGCAAGTCTTTAAATAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGACCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGTGGGATTGAAAATGTCGATCTTAGTAAT
TTTAACGGCATAAAAGAAGTAAATTTTCGTGTAGGTGAAGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAGGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAGGCAAGTAAAAATGCTATCATCAACGCAGCCAATCAGACTCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGCAATAAAGCTTGCGTGATCTTAAGCAAGAATGAAAATTTTAAAAATCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5Y6THS6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936

Multiple sequence alignment