Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   AEI02_RS06405 Genome accession   NZ_CP012206
Coordinates   1218162..1218812 (-) Length   216 a.a.
NCBI ID   WP_115784890.1    Uniprot ID   A0A5Y6PCZ6
Organism   Campylobacter jejuni strain CJ067CC45     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1213162..1223812
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI02_RS09250 - 1213353..1213574 (-) 222 WP_251814044.1 BspA family leucine-rich repeat surface protein -
  AEI02_RS09255 - 1213549..1214025 (-) 477 WP_251822354.1 hypothetical protein -
  AEI02_RS06365 (AEI02_06365) - 1214040..1215044 (-) 1005 WP_038853168.1 toxic anion resistance protein -
  AEI02_RS09130 - 1215435..1215611 (-) 177 WP_153605208.1 hypothetical protein -
  AEI02_RS06375 (AEI02_06370) - 1215706..1215933 (-) 228 WP_052783806.1 hypothetical protein -
  AEI02_RS06380 (AEI02_06375) - 1215961..1216449 (-) 489 WP_052783807.1 hypothetical protein -
  AEI02_RS06385 (AEI02_06380) - 1216468..1216965 (-) 498 WP_052783808.1 hypothetical protein -
  AEI02_RS06390 (AEI02_06385) - 1217011..1217178 (-) 168 WP_223209703.1 hypothetical protein -
  AEI02_RS06395 (AEI02_06390) - 1217228..1217755 (-) 528 WP_115784889.1 hypothetical protein -
  AEI02_RS06400 (AEI02_06395) - 1217764..1217982 (-) 219 WP_002801018.1 hypothetical protein -
  AEI02_RS06405 (AEI02_06400) CJE0566 1218162..1218812 (-) 651 WP_115784890.1 DNA/RNA non-specific endonuclease Regulator
  AEI02_RS06410 (AEI02_06405) - 1218831..1219487 (-) 657 WP_115784891.1 hypothetical protein -
  AEI02_RS06415 (AEI02_06410) - 1219484..1219999 (-) 516 WP_115784892.1 hypothetical protein -
  AEI02_RS06420 (AEI02_06415) - 1219996..1220487 (-) 492 WP_052783813.1 hypothetical protein -
  AEI02_RS06425 (AEI02_06420) - 1220498..1220905 (-) 408 WP_115784893.1 hypothetical protein -
  AEI02_RS06430 (AEI02_06425) - 1220902..1221393 (-) 492 WP_019108664.1 YopX family protein -
  AEI02_RS06435 (AEI02_06430) - 1221578..1221928 (-) 351 WP_002840065.1 hypothetical protein -
  AEI02_RS06440 (AEI02_06435) - 1221925..1222116 (-) 192 WP_002840066.1 hypothetical protein -
  AEI02_RS06445 (AEI02_06440) - 1222118..1222786 (-) 669 WP_072232303.1 hypothetical protein -
  AEI02_RS06450 (AEI02_06445) - 1222792..1223142 (-) 351 WP_002875041.1 hypothetical protein -
  AEI02_RS06455 (AEI02_06450) - 1223139..1223411 (-) 273 WP_002875042.1 hypothetical protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 25495.99 Da        Isoelectric Point: 9.7799

>NTDB_id=152246 AEI02_RS06405 WP_115784890.1 1218162..1218812(-) (CJE0566) [Campylobacter jejuni strain CJ067CC45]
MKKLMILPLLATLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYKLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDSNPQRIRNQIAIPSSYTKILKGDNFKECYQVPNHEVEDESIRSYQIKCQF

Nucleotide


Download         Length: 651 bp        

>NTDB_id=152246 AEI02_RS06405 WP_115784890.1 1218162..1218812(-) (CJE0566) [Campylobacter jejuni strain CJ067CC45]
ATGAAAAAACTTATGATTTTACCGTTGCTAGCAACCCTAGCTTTTGCTGATTATACACAATACAAACCAAGTGAAGATTT
TGCTAAGTATTTTACTAAACAAAACTGCTCACAAGTTTTAGATAAGTTTTATTATCTAAATTGTTATGATTATAATTATA
AAGGCACTAAAGCTGTAGCTTATAAATTAGAAGCGGAAAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTACGACAGGGGACACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACCTTTTTGATGAGTAATATCACTCCTCAAAATCCAC
AAATCAATCAAAGAGTTTGGAATAAAATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAACTTGGAAGTTTAGAAGTTTTA
AATTTAGTTAATTATGATAGTAATCCACAAAGAATAAGAAATCAAATTGCCATTCCAAGCTCTTACACTAAGATTTTAAA
AGGTGATAATTTTAAAGAATGTTACCAAGTGCCAAATCATGAAGTAGAAGATGAGAGTATAAGATCTTATCAGATCAAGT
GTCAATTCTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(27-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5Y6PCZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

92.523

99.074

0.917
  CJE1441 Campylobacter jejuni RM1221

91.589

99.074

0.907

Multiple sequence alignment