Detailed information    

insolico Bioinformatically predicted

Overview

Name   proC   Type   Machinery gene
Locus tag   AEI05_RS05580 Genome accession   NZ_CP012205
Coordinates   1064085..1064816 (+) Length   243 a.a.
NCBI ID   WP_002859150.1    Uniprot ID   A0AB36G763
Organism   Campylobacter jejuni strain CJ510CC45     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1059085..1069816
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI05_RS05535 (AEI05_05570) - 1059113..1059664 (+) 552 WP_002861797.1 single-stranded DNA-binding protein -
  AEI05_RS05540 (AEI05_05575) - 1059668..1060516 (+) 849 WP_260511701.1 VirK family antimicrobial peptide resistance protein -
  AEI05_RS05545 (AEI05_05580) rpsF 1060603..1060980 (+) 378 WP_002853062.1 30S ribosomal protein S6 -
  AEI05_RS05550 (AEI05_05585) ssb 1060989..1061540 (+) 552 WP_002853013.1 single-stranded DNA-binding protein -
  AEI05_RS05555 (AEI05_05590) rpsR 1061646..1061906 (+) 261 WP_002853032.1 30S ribosomal protein S18 -
  AEI05_RS05560 (AEI05_05595) - 1061966..1062436 (-) 471 Protein_1089 S16 family serine protease -
  AEI05_RS05565 (AEI05_05600) rpsR 1062437..1062628 (+) 192 Protein_1090 30S ribosomal protein S18 -
  AEI05_RS05570 (AEI05_05605) - 1062689..1063819 (-) 1131 Protein_1091 S16 family serine protease -
  AEI05_RS05575 (AEI05_05610) fliW 1063816..1064085 (+) 270 Protein_1092 flagellar assembly protein FliW -
  AEI05_RS05580 (AEI05_05615) proC 1064085..1064816 (+) 732 WP_002859150.1 pyrroline-5-carboxylate reductase Machinery gene
  AEI05_RS05585 (AEI05_05620) ctsT 1064813..1065115 (+) 303 WP_002853046.1 type II secretion system protein Machinery gene
  AEI05_RS05590 - 1065112..1065264 (+) 153 Protein_1095 hypothetical protein -
  AEI05_RS05595 (AEI05_05625) - 1065265..1066695 (-) 1431 Protein_1096 LON peptidase substrate-binding domain-containing protein -
  AEI05_RS05600 (AEI05_05630) bamD 1066712..1067359 (-) 648 WP_002877748.1 outer membrane protein assembly factor BamD -
  AEI05_RS05605 (AEI05_05635) fliW 1067520..1067909 (+) 390 WP_002852982.1 flagellar assembly protein FliW -
  AEI05_RS05610 (AEI05_05640) proC 1067909..1068640 (+) 732 WP_002932769.1 pyrroline-5-carboxylate reductase Machinery gene
  AEI05_RS05615 (AEI05_05645) ctsT 1068637..1068939 (+) 303 WP_057042823.1 hypothetical protein Machinery gene
  AEI05_RS05620 (AEI05_05650) - 1068936..1069598 (+) 663 WP_002866103.1 hypothetical protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26559.95 Da        Isoelectric Point: 8.5934

>NTDB_id=152211 AEI05_RS05580 WP_002859150.1 1064085..1064816(+) (proC) [Campylobacter jejuni strain CJ510CC45]
MLYILANGSMATALAYGLKDDYEICIVGRSIEKLQALAKEGFKTLLYKDFNIEGKDVILAFKPYALENIAQMLKGQARIL
ISVLANVDFEKLQTIKAQNYVRIIPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSSALLEHEHPAIIKENICSPGGVTIKGIKILEQKGIRGSFFEAINAS
SAK

Nucleotide


Download         Length: 732 bp        

>NTDB_id=152211 AEI05_RS05580 WP_002859150.1 1064085..1064816(+) (proC) [Campylobacter jejuni strain CJ510CC45]
ATGCTCTATATACTTGCAAATGGATCTATGGCAACAGCCTTAGCCTATGGGTTAAAAGATGATTATGAAATTTGTATAGT
AGGAAGAAGTATAGAAAAACTTCAAGCCCTCGCCAAAGAAGGCTTTAAAACCTTACTTTACAAAGATTTTAACATAGAAG
GTAAAGATGTTATTTTAGCATTTAAACCTTATGCTTTAGAAAATATTGCTCAAATGCTAAAAGGACAAGCACGTATCTTA
ATCTCTGTTTTAGCCAATGTTGATTTTGAAAAACTACAAACCATCAAAGCTCAAAATTATGTTAGAATAATACCCAATAC
AGCAGCTAAATACAAGGCTTCAACCACACCATATATACTTAAAAACTCTCATTTTGAAAATGAAATTTTAGACATTTTAA
AAACTTTTGGCTCGGCTTATAAATTAGATAATGAAATACAAATGAATGCAGCTATGGCGATTAGCGGCTGCGCTCCTGCT
TTTTTAGCACTTATAGCAGAAAGCATTGCTAATGCTGGAGTTTATGAAGGTTTGTCAAAAGAACTTAGTCTCAATCTTAC
GCGCTCTTTATTTAAAAGCTCTAGTGCTTTACTAGAACATGAGCATCCAGCTATTATCAAAGAAAATATTTGCTCCCCTG
GAGGAGTTACAATAAAAGGCATAAAAATACTCGAACAAAAAGGAATTCGCGGAAGTTTTTTTGAAGCCATAAATGCTAGC
AGCGCTAAATGA

Domains

Predicted by InterproScan.

Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer)

(145-242)

NADP oxidoreductase coenzyme F420-dependent (F420_oxidored)

(4-85)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  proC Campylobacter jejuni subsp. jejuni 81-176

99.588

100

0.996

Multiple sequence alignment