Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   AKG30_RS07345 Genome accession   NZ_CP012187
Coordinates   1518236..1519477 (-) Length   413 a.a.
NCBI ID   WP_003602466.1    Uniprot ID   A0A422M4M9
Organism   Lacticaseibacillus paracasei strain CAUH35     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1513236..1524477
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AKG30_RS07340 (AKG30_07350) - 1516484..1518211 (-) 1728 WP_003575285.1 proline--tRNA ligase -
  AKG30_RS07345 (AKG30_07355) eeP 1518236..1519477 (-) 1242 WP_003602466.1 RIP metalloprotease RseP Regulator
  AKG30_RS07350 (AKG30_07360) - 1519494..1520282 (-) 789 WP_050894062.1 phosphatidate cytidylyltransferase -
  AKG30_RS07355 (AKG30_07365) - 1520318..1521070 (-) 753 WP_050894064.1 isoprenyl transferase -
  AKG30_RS07360 (AKG30_07370) frr 1521623..1522180 (-) 558 WP_003565804.1 ribosome recycling factor -
  AKG30_RS07365 (AKG30_07375) pyrH 1522180..1522899 (-) 720 WP_003565806.1 UMP kinase -
  AKG30_RS07370 (AKG30_07380) tsf 1523135..1524016 (-) 882 WP_050894065.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45169.81 Da        Isoelectric Point: 8.6663

>NTDB_id=152103 AKG30_RS07345 WP_003602466.1 1518236..1519477(-) (eeP) [Lacticaseibacillus paracasei strain CAUH35]
MTTIIAFIVIFCILVVVHEFGHFYFAKRSGILVREFSIGMGPKLWASHKNNTTYTLRLLPLGGYVRMAGWQDEEDEIKPG
TMLSLILNDQGKVVRINASDKTTLAGGMPVQVSRVDLVKDLVIEGYPNGDETTLQTWQVDHDATIIEEDGTEVQIAPEDV
QFQNAPVWRRLLVNFAGPMNNFLLAILAFMIYGLFFGVQVLNTNQIGTVVPGYPAAEAGLKSNATVQTIDGQKMSSFTDL
SKIVSKNAGKSVTFTVKENGKSKNIVIKPNKEGKIGVEAHIDKSPANAIPFGFSQTWNLAVRTWDVLKSMVTGGFSLNKL
AGPVGIYTMTSQSAKGGIQGLLFFMGYLSLGLGITNLLPIPVLDGGKILLNLIEIIRRKPLKPETEGVVTMIGLGLMVLL
MLAVTINDIMRYF

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=152103 AKG30_RS07345 WP_003602466.1 1518236..1519477(-) (eeP) [Lacticaseibacillus paracasei strain CAUH35]
ATGACCACTATCATCGCCTTTATCGTTATCTTCTGCATTCTTGTGGTAGTTCACGAGTTTGGCCATTTTTACTTTGCAAA
ACGAAGCGGCATTCTAGTCCGGGAATTTTCGATCGGTATGGGCCCGAAGCTGTGGGCGTCGCACAAGAACAATACGACCT
ACACGCTGCGGTTGCTACCACTTGGCGGATACGTCCGCATGGCTGGCTGGCAAGATGAGGAGGACGAGATTAAGCCCGGG
ACGATGCTGAGCCTGATTCTTAACGATCAAGGCAAGGTTGTCCGGATCAATGCCAGTGACAAAACGACTTTGGCCGGTGG
GATGCCGGTTCAAGTGAGCCGCGTCGATTTGGTCAAAGATCTGGTGATTGAAGGTTATCCGAACGGGGACGAAACAACCT
TGCAAACTTGGCAGGTTGACCACGATGCGACGATCATTGAAGAAGACGGAACCGAGGTTCAGATCGCGCCAGAAGACGTT
CAGTTTCAAAACGCCCCGGTTTGGCGCCGGTTATTGGTCAACTTCGCCGGTCCGATGAATAACTTCTTACTCGCGATTCT
AGCTTTTATGATTTACGGTCTGTTTTTTGGTGTTCAGGTGCTCAATACCAACCAAATCGGAACAGTTGTGCCAGGTTATC
CAGCCGCAGAAGCTGGTCTTAAGTCCAATGCGACGGTGCAAACGATTGACGGTCAAAAAATGTCATCATTCACGGATCTT
TCAAAGATCGTCAGTAAAAATGCCGGTAAATCAGTGACATTTACCGTGAAGGAAAACGGTAAAAGCAAGAACATCGTGAT
CAAGCCAAATAAAGAAGGCAAGATCGGGGTTGAAGCACACATCGATAAGTCCCCAGCAAACGCCATTCCTTTTGGCTTTT
CTCAAACTTGGAATTTGGCTGTCCGCACTTGGGACGTGCTCAAATCCATGGTGACCGGCGGTTTTTCACTCAATAAACTG
GCTGGCCCGGTTGGTATTTATACCATGACGAGTCAAAGTGCCAAAGGGGGTATTCAAGGCTTGCTATTCTTTATGGGTTA
CTTGAGTCTCGGCTTAGGGATTACCAATTTGTTGCCGATTCCAGTGCTTGATGGTGGTAAAATTCTTTTGAACCTGATCG
AAATTATTCGCCGTAAGCCATTAAAACCGGAAACGGAAGGCGTTGTGACCATGATTGGCTTGGGCCTGATGGTTCTATTA
ATGCTAGCGGTCACAATCAACGATATCATGCGCTACTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(206-257)

Peptidase family M50 (Peptidase_M50)

(6-400)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A422M4M9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.057

100

0.504
  eeP Streptococcus thermophilus LMD-9

48.821

100

0.501

Multiple sequence alignment