Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   A4U85_RS17545 Genome accession   NZ_CP015121
Coordinates   3681979..3682614 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain ab736     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3676979..3687614
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A4U85_RS17525 (A4U85_17370) - 3677055..3677870 (+) 816 WP_000011163.1 DsbC family protein -
  A4U85_RS17530 (A4U85_17375) - 3678115..3679416 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  A4U85_RS17535 (A4U85_17380) thrC 3679472..3680611 (+) 1140 WP_000063594.1 threonine synthase -
  A4U85_RS17540 (A4U85_17385) pbpG 3680720..3681766 (-) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  A4U85_RS17545 (A4U85_17390) letA 3681979..3682614 (+) 636 WP_000633799.1 response regulator Regulator
  A4U85_RS17550 (A4U85_17395) pilS 3682625..3684193 (+) 1569 WP_001160331.1 sensor histidine kinase Regulator
  A4U85_RS17555 (A4U85_17400) - 3684217..3685638 (+) 1422 WP_000840559.1 sigma-54-dependent transcriptional regulator -
  A4U85_RS17560 (A4U85_17405) - 3685642..3686826 (-) 1185 WP_000939110.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=152011 A4U85_RS17545 WP_000633799.1 3681979..3682614(+) (letA) [Acinetobacter baumannii strain ab736]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=152011 A4U85_RS17545 WP_000633799.1 3681979..3682614(+) (letA) [Acinetobacter baumannii strain ab736]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGTGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTTGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCATTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55