Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AC241_RS05970 Genome accession   NZ_CP012099
Coordinates   1155762..1155938 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus thuringiensis strain HS18-1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1150762..1160938
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AC241_RS05950 (AC241_05945) clpC 1151088..1153688 (+) 2601 WP_050842860.1 ATP-dependent chaperone ClpB Regulator
  AC241_RS05955 (AC241_05950) - 1153726..1153908 (-) 183 WP_001211116.1 YjzD family protein -
  AC241_RS05960 (AC241_05955) - 1154065..1154799 (+) 735 WP_016082478.1 hydrolase -
  AC241_RS05965 (AC241_05960) - 1154829..1155707 (+) 879 WP_103574448.1 NAD-dependent epimerase/dehydratase family protein -
  AC241_RS05970 (AC241_05965) comZ 1155762..1155938 (+) 177 WP_001986215.1 ComZ family protein Regulator
  AC241_RS05975 (AC241_05970) fabH 1156170..1157102 (+) 933 WP_016082476.1 beta-ketoacyl-ACP synthase III -
  AC241_RS05980 (AC241_05975) fabF 1157134..1158372 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  AC241_RS05985 (AC241_05980) - 1158480..1159268 (+) 789 WP_016082475.1 DUF2268 domain-containing protein -
  AC241_RS05990 (AC241_05985) - 1159413..1160159 (+) 747 WP_000966129.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=151377 AC241_RS05970 WP_001986215.1 1155762..1155938(+) (comZ) [Bacillus thuringiensis strain HS18-1]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=151377 AC241_RS05970 WP_001986215.1 1155762..1155938(+) (comZ) [Bacillus thuringiensis strain HS18-1]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCAATTTTAGATGATAACGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAATTGTTAATGAAAGTTATGAACGAAGCTTATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment