Detailed information NTG0151376

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: AC241_RS05950
• Genome accession: NZ_CP012099
• Coordinates: 1151088..1153688 (+)
• Length: 866 a.a.
• NCBI ID: WP_050842860.1
• Uniprot ID: -
• Organism: Bacillus thuringiensis strain HS18-1
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1146088..1158688

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AC241_RS05905 (AC241_05900)	-	1146546..1146808 (+)	263	Protein_1071	hypothetical protein	-
AC241_RS05910 (AC241_05905)	prsA	1146849..1147706 (-)	858	WP_029442131.1	peptidylprolyl isomerase PrsA	-
AC241_RS05915 (AC241_05910)	-	1147836..1147967 (-)	132	WP_050842856.1	DUF3941 domain-containing protein	-
AC241_RS05920 (AC241_05915)	-	1148068..1148925 (+)	858	WP_016082482.1	YitT family protein	-
AC241_RS05925 (AC241_05920)	-	1148951..1149148 (-)	198	WP_050842858.1	DUF3813 domain-containing protein	-
AC241_RS05930 (AC241_05925)	-	1149149..1149289 (-)	141	WP_000516816.1	hypothetical protein	-
AC241_RS05935 (AC241_05930)	-	1149395..1150204 (-)	810	WP_001041241.1	Cof-type HAD-IIB family hydrolase	-
AC241_RS05945 (AC241_05940)	-	1150697..1150876 (+)	180	WP_016082481.1	YjzC family protein	-
AC241_RS05950 (AC241_05945)	clpC	1151088..1153688 (+)	2601	WP_050842860.1	ATP-dependent chaperone ClpB	Regulator
AC241_RS05955 (AC241_05950)	-	1153726..1153908 (-)	183	WP_001211116.1	YjzD family protein	-
AC241_RS05960 (AC241_05955)	-	1154065..1154799 (+)	735	WP_016082478.1	hydrolase	-
AC241_RS05965 (AC241_05960)	-	1154829..1155707 (+)	879	WP_103574448.1	NAD-dependent epimerase/dehydratase family protein	-
AC241_RS05970 (AC241_05965)	comZ	1155762..1155938 (+)	177	WP_001986215.1	ComZ family protein	Regulator
AC241_RS05975 (AC241_05970)	fabH	1156170..1157102 (+)	933	WP_016082476.1	beta-ketoacyl-ACP synthase III	-
AC241_RS05980 (AC241_05975)	fabF	1157134..1158372 (+)	1239	WP_000412656.1	beta-ketoacyl-ACP synthase II	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97384.42 Da
• Isoelectric Point: 5.1561

>NTDB_id=151376 AC241_RS05950 WP_050842860.1 1151088..1153688(+) (clpC) [Bacillus thuringiensis strain HS18-1]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEALKQGAESLIKKKPSVTGSGAE
VGKLYVKSALQQLLVRAGKEAEKLQDDYISVEHVLLAFSEEKGDINQLFTTLHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHIT
VELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNCHVVVDVENNELVVHVK

Nucleotide

• Length: 2601 bp

>NTDB_id=151376 AC241_RS05950 WP_050842860.1 1151088..1153688(+) (clpC) [Bacillus thuringiensis strain HS18-1]
ATGGACTTAAATCAAATGACAACAAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCACCA
AGAGGTGGATACTGTTCATCTATTACTTGCATTATTAGAAGAGCAAGATGGATTAGCGGTACGTATATTTCAAAAAATGA
ATGTTGATATAGAAGCGTTAAAGCAAGGTGCTGAAAGCTTAATTAAAAAGAAACCTTCTGTAACGGGAAGCGGTGCAGAA
GTTGGAAAATTGTATGTAAAGAGCGCTCTGCAACAACTGCTTGTAAGAGCAGGGAAAGAAGCAGAAAAACTGCAGGATGA
TTACATTTCAGTAGAACATGTATTGCTTGCTTTTTCTGAAGAAAAAGGCGATATAAATCAATTATTTACAACATTGCATA
TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT
TATGAAGCGTTAGAAAAATATGGCCGTGATTTAGTGGCAGAAGTGAGAGCCGGGAAAATTGATCCTGTTATCGGCCGAGA
TAGTGAAATTCGACGCGTTATCCGCATTCTTTCACGTAAAACGAAAAACAATCCTGTTTTAATTGGGGAGCCAGGTGTTG
GTAAAACAGCAATCGTTGAAGGATTAGCACAGCGTATTGTGAAAAAGGATGTACCTGAAGGATTGAAAGATAGAACGATT
TTTGCGTTAGATATGAGTGCGCTCGTAGCTGGTGCGAAATTCCGTGGTGAGTTCGAAGAGCGTCTGCAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGACGCATTTTATTATTCATTGATGAACTTCATACAATTGTTGGTGCTGGTAAAACAGAAG
GTGCAATGGATGCAGGGAATATGTTAAAACCGATGCTTGCGCGTGGTGAACTGCATTGTATCGGGGCGACAACGTTAGAT
GAATATCGTAAATATATTGAAAAAGATCCAGCGCTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAACCAACTGTTGA
AGATACAATCTCAATTTTACGTGGATTAAAAGAACGCTTTGAAATTTATCACGGTGTAAATATTCATGACCGAGCGATTG
TAGCAGCGTCAGTTTTATCAGATCGATATATTTCAGATCGCTTCTTACCGGATAAAGCAATTGACCTTGTTGACGAAGCA
TGCGCAACAATTCGTACAGAAATTGATTCTATGCCGACAGAATTAGATGAAGTAACGCGTCGTATTATGCAGTTAGAAAT
TGAGGAAGCAGCTCTTGGAAAAGAAACGGATCGTGGTAGCCAAGAGCGCCTAAAAACATTGCAACGTGAATTATCGGATT
TAAAAGAAGTTGCAAGTGGTATGAGAGCGAAATGGGAGAAAGAAAAAGAAGACATTCACAAAGTTCGTGACTTACGTGAA
CATTTAGAACGTTTGCGCCGTGAATTAGAAGAAGCAGAAGGTAATTACGATTTAAATAAAGCAGCCGAACTTCGTCACGG
GAAAATTCCTGCAATCGAAAAAGAATTAAAAGAAGCGGAAGAAATGGGCGCGCATAATAAACAAGAAAATCGTTTATTAC
GTGAGGAAGTAAGTGAAGAAGAAATTGCAGATATTGTTTCACGCTGGACTGGTATTCCTGTTGCTAAACTTGTTGAAGGA
GAACGCGAGAAATTACTACGCTTAGAGCAAATCTTATCAGAGCGTGTCATCGGACAAGAGGAAGCAGTAAGCTTAGTATC
AGACGCGGTTCTTCGTGCTCGCGCTGGTATTAAAGACCCGAATCGTCCAATTGGTTCCTTCATTTTCTTAGGCCCTACGG
GTGTTGGTAAAACAGAACTTGCAAAAACGTTAGCGCAGTCTTTATTCGATAGTGAAGAGCAAATGATTCGTATTGACATG
TCTGAGTATATGGAGAAACACGCAGTGTCACGCTTAATTGGTGCACCTCCTGGATATGTAGGATATGAAGAAGGCGGTCA
ATTAACAGAAGCGGTAAGACGTAAACCATATTCCGTTATTTTATTAGATGAAATTGAAAAAGCACATCCAGAAGTATTCA
ATATTTTATTACAAATGTTAGATGATGGACGCATTACAGATTCGCAAGGTCGTACAGTGGACTTTAAAAACACAGTTATT
ATTATGACTTCAAATATTGGATCTGCTCATTTACTAGACGGATTAGAAGAAGATGGTTCGATTAAAGAGGAATCAAGAGA
CCTTGTAATGGGGCAATTAAGAGGGCATTTCCGCCCTGAATTTTTAAACCGTGTTGATGAAATTATTTTATTCAAACCTC
TTACAACGAATGAAATTAAAGGCATTGTTGATAAAATTGTAAAAGAATTACAAGGTCGTCTAGCTGACCGTCACATTACA
GTAGAATTAACAGATGCAGCAAAAGAATTTGTTGTAGAAGCTGGTTTCGATCCAATGTACGGAGCTCGTCCGTTAAAACG
ATACGTACAACGTCAAGTGGAAACGAAATTAGCAAGAGAATTAATTGCAGGAACAATTACTGACAATTGTCACGTAGTTG
TTGATGTAGAAAATAACGAATTAGTCGTTCATGTGAAATAA

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

• AAA lid domain (AAA_lid_9) (345-447)

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.771	100	0.483
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	42.039	100	0.424
clpC	Lactococcus lactis subsp. cremoris KW2	47.199	82.448	0.389