Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   AC806_RS07600 Genome accession   NZ_CP012047
Coordinates   1612460..1613725 (-) Length   421 a.a.
NCBI ID   WP_061840602.1    Uniprot ID   A0AB35HPE7
Organism   Tetragenococcus halophilus strain MJ4     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1607460..1618725
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AC806_RS07595 (AC806_07585) - 1610669..1612375 (-) 1707 WP_069029107.1 proline--tRNA ligase -
  AC806_RS07600 (AC806_07590) eeP 1612460..1613725 (-) 1266 WP_061840602.1 RIP metalloprotease RseP Regulator
  AC806_RS07605 (AC806_07595) - 1613877..1614683 (-) 807 WP_014125331.1 phosphatidate cytidylyltransferase -
  AC806_RS07610 (AC806_07600) - 1614680..1615480 (-) 801 WP_014125332.1 isoprenyl transferase -
  AC806_RS07615 (AC806_07605) frr 1615912..1616469 (-) 558 WP_014125333.1 ribosome recycling factor -
  AC806_RS07620 (AC806_07610) pyrH 1616473..1617192 (-) 720 WP_041591846.1 UMP kinase -
  AC806_RS07625 (AC806_07615) tsf 1617407..1618288 (-) 882 WP_014125335.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 421 a.a.        Molecular weight: 46232.03 Da        Isoelectric Point: 4.1638

>NTDB_id=150842 AC806_RS07600 WP_061840602.1 1612460..1613725(-) (eeP) [Tetragenococcus halophilus strain MJ4]
MKTLITFLIVFSVVVVIHEFGHFYFAKKSGILVREFSIGMGPKLFSHQAKDGTTYTIRAIPMGGYVRMAGYEDEEELKAG
MPVSLEVNENNEVIKINTSSKVQLENAIPLEVTRYDLTEALEITGFVNGNEDNVASYSVNHEAMIIEEDGTQLRIAPRDV
QFQSAKLWQRMLTNFAGPMNNFLLTIVLFIAIVFLQGGVPNEDSTVLGEVNPEGVAATAGLRSGDEIVAIDQEEVSSWPE
LQQTIQQQPDEELSLEVNRDDQTFSVDATPESVESGNQDIGQLGVQASLKTGFWDKVVGGVKESWDMLVQILAALRNLVT
NFSLDQLGGPVAIFQMSDQAAQQGAMTVLLLTAMISVNLGIVNLLPIPGLDGGKLLLNIVEAIRGKPISEEKEGMITLVG
FGLLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=150842 AC806_RS07600 WP_061840602.1 1612460..1613725(-) (eeP) [Tetragenococcus halophilus strain MJ4]
ATGAAGACATTGATTACATTTTTAATCGTCTTCTCAGTAGTTGTGGTAATACATGAATTTGGACATTTTTATTTTGCTAA
GAAATCGGGCATTTTAGTCCGTGAATTTTCTATCGGCATGGGTCCTAAGCTATTCAGCCACCAAGCTAAAGACGGTACGA
CTTACACCATACGAGCCATACCGATGGGTGGTTATGTTCGGATGGCAGGCTATGAGGATGAAGAAGAACTAAAAGCTGGA
ATGCCGGTATCTTTGGAAGTAAATGAGAATAACGAAGTCATTAAAATCAATACAAGTTCAAAAGTACAGTTAGAAAATGC
GATCCCTTTAGAAGTGACTCGTTATGATTTGACTGAGGCGCTTGAAATTACAGGATTTGTTAATGGAAATGAAGATAATG
TAGCAAGCTATTCAGTAAATCATGAGGCAATGATTATTGAAGAAGACGGTACGCAGCTGCGTATCGCACCTAGAGATGTA
CAGTTTCAGTCTGCTAAGTTATGGCAAAGAATGTTGACAAATTTCGCGGGACCTATGAATAATTTCTTATTAACGATTGT
GTTATTCATTGCCATTGTATTTTTACAAGGCGGAGTTCCTAATGAAGACTCAACAGTACTTGGTGAAGTAAATCCTGAAG
GTGTAGCAGCAACAGCCGGTTTAAGGTCGGGGGATGAAATTGTAGCGATCGACCAAGAAGAAGTATCAAGTTGGCCTGAA
CTGCAACAAACGATTCAACAACAACCTGATGAAGAGTTATCGCTTGAAGTTAACCGGGATGACCAAACTTTTTCTGTAGA
TGCAACGCCTGAAAGCGTAGAATCGGGTAATCAAGATATTGGGCAATTGGGCGTACAAGCATCGCTTAAAACTGGTTTTT
GGGACAAAGTAGTCGGCGGTGTGAAAGAAAGTTGGGACATGCTTGTCCAAATTTTAGCTGCCTTAAGAAACTTGGTAACT
AATTTTAGTTTGGATCAATTAGGCGGTCCAGTTGCTATTTTCCAAATGTCTGATCAAGCTGCTCAACAAGGCGCTATGAC
TGTCTTACTTTTGACCGCTATGATATCAGTCAATTTAGGTATCGTGAACTTACTACCCATTCCTGGTTTGGACGGTGGAA
AATTACTACTTAATATAGTCGAAGCTATACGTGGAAAACCAATTAGTGAAGAAAAAGAAGGGATGATTACCTTAGTAGGT
TTTGGTTTGTTGATGTTATTAATGGTATTAGTCACTTGGAATGATATCCAGCGCTTTTTCTTTTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-407)

PDZ domain (PDZ_6)

(209-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

51.168

100

0.52
  eeP Streptococcus thermophilus LMD-9

51.168

100

0.52

Multiple sequence alignment