Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | PA8281_RS02095 | Genome accession | NZ_CP015002 |
| Coordinates | 449135..449500 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain PA8281 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 444135..454500
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PA8281_RS02065 (PA8281_02992) | pyrR | 444757..445269 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| PA8281_RS02070 (PA8281_02993) | ruvX | 445381..445815 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| PA8281_RS02075 (PA8281_02994) | - | 445815..446384 (-) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| PA8281_RS02080 (PA8281_02995) | - | 446433..447326 (-) | 894 | WP_003084580.1 | TonB family protein | - |
| PA8281_RS02085 (PA8281_02996) | gshB | 447473..448426 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| PA8281_RS02090 (PA8281_02997) | pilG | 448681..449088 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| PA8281_RS02095 (PA8281_06854) | pilH | 449135..449500 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| PA8281_RS02100 (PA8281_02999) | - | 449551..450087 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| PA8281_RS02105 (PA8281_03000) | pilJ | 450172..452220 (+) | 2049 | WP_003100940.1 | chemotaxis chemoreceptor PilJ | - |
| PA8281_RS02110 (PA8281_03001) | pilK | 452281..453156 (+) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=150828 PA8281_RS02095 WP_003084587.1 449135..449500(+) (pilH) [Pseudomonas aeruginosa strain PA8281]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=150828 PA8281_RS02095 WP_003084587.1 449135..449500(+) (pilH) [Pseudomonas aeruginosa strain PA8281]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |