Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   ABN16_RS11900 Genome accession   NZ_CP012033
Coordinates   2634942..2636219 (+) Length   425 a.a.
NCBI ID   WP_048736424.1    Uniprot ID   -
Organism   Levilactobacillus koreensis strain 26-25     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2629942..2641219
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABN16_RS11875 (ABN16_11890) pyrH 2631405..2632127 (+) 723 WP_048735911.1 UMP kinase -
  ABN16_RS11880 (ABN16_11895) frr 2632130..2632687 (+) 558 WP_048735912.1 ribosome recycling factor -
  ABN16_RS11885 (ABN16_11900) - 2632716..2633135 (+) 420 WP_048735913.1 hypothetical protein -
  ABN16_RS11890 (ABN16_11905) - 2633242..2634027 (+) 786 WP_048735914.1 isoprenyl transferase -
  ABN16_RS11895 (ABN16_11910) - 2634054..2634842 (+) 789 WP_048735915.1 phosphatidate cytidylyltransferase -
  ABN16_RS11900 (ABN16_11915) eeP 2634942..2636219 (+) 1278 WP_048736424.1 RIP metalloprotease RseP Regulator
  ABN16_RS11905 (ABN16_11920) - 2636255..2637967 (+) 1713 WP_048735916.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 45954.33 Da        Isoelectric Point: 7.2506

>NTDB_id=150698 ABN16_RS11900 WP_048736424.1 2634942..2636219(+) (eeP) [Levilactobacillus koreensis strain 26-25]
MITTIITFIIVFGILVIVHEFGHFYFAKRGGILVREFSIGMGPKLVYHRGKDGTTYTLRLLPVGGYVRMAGAEDDEEELK
PGTPVSLYVGDAGKVERINTSKKSTLFNGIPLEVTGADLEDELWIEGYENGDEAEVKRYPVAHNATIIESDGTELQIAPK
DVQFQAASLGRRLMTNFAGPMNNILLAIVTFMLMSFVQGGVAMGTNQVQVASSPVSVAKKAGVQSNDKITAVNGKKTTSW
TDLSMAIQPLANKQTVLTVKRGDTTHKITLTPAGEKSNGKTVGMIGITQAQDKHIGAILASGFTQTWTMTKALFGALWHM
VSGHFSLNDLGGPVAIFATTSQATQYGVVGVLNFLAFLSINLAIVNLLPIPALDGGKILLNFIEAIRRKPLSENVEAAIT
LVGVGFLVLLMLLVTWNDIERYFIH

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=150698 ABN16_RS11900 WP_048736424.1 2634942..2636219(+) (eeP) [Levilactobacillus koreensis strain 26-25]
GTGATTACGACGATTATTACCTTTATCATTGTGTTTGGAATTCTGGTCATCGTGCATGAATTCGGTCACTTTTATTTCGC
CAAACGCGGCGGTATTTTAGTGCGTGAATTTTCCATTGGGATGGGGCCCAAGCTCGTCTATCACCGCGGTAAGGATGGCA
CAACGTATACGTTACGCCTGTTGCCAGTCGGTGGGTACGTCCGCATGGCGGGTGCCGAAGATGACGAGGAAGAGTTAAAG
CCCGGGACCCCCGTGAGTTTATACGTCGGGGATGCAGGCAAGGTTGAACGGATCAATACAAGTAAGAAATCAACGTTATT
TAACGGGATTCCACTAGAAGTTACGGGCGCTGATCTAGAAGATGAATTGTGGATCGAAGGGTATGAAAATGGGGACGAAG
CCGAAGTCAAACGCTACCCAGTTGCTCACAACGCCACGATCATCGAAAGTGACGGGACCGAGCTGCAGATTGCCCCGAAG
GACGTTCAGTTTCAGGCCGCCTCGCTAGGTCGCCGGCTGATGACCAACTTTGCCGGACCAATGAACAACATCTTATTGGC
CATCGTGACCTTTATGCTGATGTCGTTTGTCCAGGGTGGCGTCGCCATGGGGACCAATCAGGTTCAAGTGGCAAGTTCAC
CCGTGTCCGTTGCTAAAAAGGCTGGTGTGCAGTCTAACGATAAGATTACGGCGGTCAACGGTAAGAAGACGACGAGTTGG
ACGGATCTGAGCATGGCGATTCAGCCATTGGCTAACAAGCAGACGGTCCTGACCGTTAAACGGGGGGACACGACCCACAA
GATTACGTTGACGCCGGCTGGTGAAAAGTCCAACGGCAAGACGGTCGGGATGATCGGCATCACACAGGCCCAAGATAAGC
ACATTGGGGCGATCTTAGCATCCGGGTTTACACAGACGTGGACCATGACCAAAGCCTTATTTGGCGCACTGTGGCACATG
GTTTCCGGGCACTTTAGCCTAAACGACTTGGGTGGGCCCGTGGCGATTTTTGCGACGACCTCTCAAGCCACACAATACGG
GGTCGTTGGGGTCTTGAACTTCCTGGCCTTTCTATCGATTAACTTAGCAATTGTCAATTTACTGCCAATTCCAGCCTTGG
ATGGTGGTAAAATATTATTAAACTTTATTGAAGCCATTCGGCGTAAGCCCCTTTCAGAAAATGTGGAAGCGGCAATTACG
TTGGTGGGGGTAGGGTTCTTGGTTCTACTCATGCTGTTAGTGACGTGGAACGACATTGAACGTTACTTTATTCATTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(214-261)

Peptidase family M50 (Peptidase_M50)

(7-410)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.941

100

0.489
  eeP Streptococcus thermophilus LMD-9

48.706

100

0.487

Multiple sequence alignment