Detailed information NTG0150603

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: WX60_RS07935
• Genome accession: NZ_CP012027
• Coordinates: 1459757..1462846 (-)
• Length: 1029 a.a.
• NCBI ID: WP_082299264.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain FA6140
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1454757..1467846

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WX60_RS07920 (WX60_01499)	yccS	1455934..1458084 (+)	2151	WP_003697785.1	YccS family putative transporter	-
WX60_RS07925 (WX60_01500)	-	1458566..1458850 (-)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
WX60_RS07935 (WX60_01501)	pilC	1459757..1462846 (-)	3090	WP_082299264.1	PilC family type IV pilus tip adhesin	Machinery gene
WX60_RS07940 (WX60_01502)	-	1463533..1463796 (+)	264	WP_229433460.1	hypothetical protein	-
WX60_RS07945 (WX60_01503)	gnd	1463876..1465324 (+)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
WX60_RS07950 (WX60_01504)	waaA	1465387..1466658 (+)	1272	WP_010360974.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
WX60_RS07955 (WX60_01505)	-	1466699..1467148 (+)	450	WP_003688065.1	CopD family copper resistance protein	-

Sequence

Protein

• Length: 1029 a.a.
• Molecular weight: 112980.42 Da
• Isoelectric Point: 9.8738

>NTDB_id=150603 WX60_RS07935 WP_082299264.1 1459757..1462846(-) (pilC) [Neisseria gonorrhoeae strain FA6140]
MNKTLKRQVFRHTALYAAILMFSHTGGRGGGQAQAQTYKYAIVMNAQNQPEVKSNVPYSIKDKDRKRVFDYTSQKSSLGR
TNNFISFNNNDEVVARKNGTAVFGTATYLPPYGKVSGFDADALKERANAVDWIRTTRPGLAGYAYTDVICRDAGQCPQLV
YETKFAFGQQGLQRNGNKLDIYEDKSRDNSPIYKLKDYPWLGVSFNLGSENTVKNGRSSGRLISSFSENNNNQTIVSTTR
DRPISLGDRQREHTAVAYYLNAKLHLLDKKRIKDIAQGKTVDLGTLRPRVETTGRNWLSYWATWKIEDKGNITVRLGLPE
VKAGRCINKPNPNPKSALSPALTAPALWFGPVQNGKVQMYSASVSTYPDSSSSRIFLQELKTQTEPGKPGRYSLKSLNDG
EIKSRQPSFNGRQTIIRLDDGVHLIKLNGSKDEVAAFVNLNGNNTGKNDTFGIVKEANVNLEADEWKKVLLPWTVRGPDN
DNKFKSINQKPEKYSQRYRIRDNNGNRDLGDIVNSPIVAVGGYLATSANDGMVHIFKKTGTDQRGYELKLSYIPGTMPRK
DIESNDSTLAKELRAFAEKGYVGDRYGVDGGFVLRQVEDRVFMFGAMGLGGRGAYALDLSKTNGNYPAAAPLFDVKDGDK
KGKNRVEVELGYTVGTPQIGKTQNGTYSAFLASGYAAKQIDDSTNKTALYVYDLKDTLGTPIAKIEVKDGKGGLSSPTLV
DKDLDGIVDIAYAGDRGGNMYRFDLSGDNPSKWTVRTIFQGTKPITSAPAVSRLADKRVVIFGTGSDLSEQDVVDKDQQY
IYGIFDDDKGTVKVTVQNGTGGGLLEQVLKEENKTLFLNKGSDGSGSKGWVVKLKEGQRVTVKPTVVLRTAFVTIRKYKD
DGCGADTAILGINTADGGALTPRSARPIVPEANKDVAQYSGHKTSSKGKSIPIGCMEKDGKTVCPNGYVYDKPVNVRYLD
EKKTDDFPVTADGDAGGSGTFKEGKKPARNNRCFSGKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3090 bp

>NTDB_id=150603 WX60_RS07935 WP_082299264.1 1459757..1462846(-) (pilC) [Neisseria gonorrhoeae strain FA6140]
ATGAATAAAACTTTGAAACGGCAGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GCGGGGGGGGGGGCAGGCGCAGGCGCAAACGTATAAATACGCTATTGTGATGAACGCGCAAAACCAGCCCGAGGTAAAGT
CGAATGTGCCATATTCAATAAAGGACAAAGACAGGAAGCGGGTATTTGACTATACGAGCCAGAAAAGCAGCTTAGGCAGG
ACAAACAATTTTATCTCATTCAACAATAACGATGAAGTTGTTGCTCGAAAAAACGGTACTGCCGTTTTTGGCACAGCCAC
CTACCTGCCGCCCTACGGCAAGGTTTCCGGTTTTGATGCCGACGCTCTGAAAGAGCGCGCCAATGCCGTTGATTGGATTC
GTACCACCCGGCCCGGGCTGGCAGGCTACGCCTACACCGACGTCATATGCAGAGACGCAGGGCAATGCCCCCAACTTGTC
TATGAGACCAAATTTGCCTTCGGTCAACAAGGGTTGCAAAGAAATGGCAACAAGCTGGATATATACGAAGACAAAAGCCG
CGACAATTCGCCCATTTACAAATTGAAGGATTATCCATGGTTGGGCGTATCTTTCAATTTGGGCAGCGAGAATACCGTCA
AAAATGGCAGATCATCCGGCAGATTGATATCTTCTTTTAGTGAAAACAATAATAATCAAACCATCGTCTCTACGACACGA
GACCGCCCTATTTCCCTTGGCGACCGGCAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAGCTGCACCTGCT
GGACAAAAAAAGGATTAAAGATATCGCCCAAGGCAAAACAGTGGATTTGGGCACCTTGAGACCGCGCGTCGAGACGACAG
GACGAAACTGGCTAAGTTATTGGGCTACGTGGAAGATTGAAGATAAAGGGAACATTACAGTCCGCCTCGGCCTGCCGGAA
GTCAAAGCAGGCCGCTGCATCAACAAACCGAACCCCAATCCCAAATCAGCCCTTTCGCCGGCACTGACCGCCCCCGCGCT
GTGGTTCGGCCCTGTGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCGGTTTCTACCTACCCCGACAGTTCGAGCAGCC
GCATCTTCCTCCAAGAGCTGAAAACTCAAACCGAACCCGGCAAACCCGGCCGCTATTCCCTCAAATCTTTGAATGATGGT
GAGATTAAAAGTCGACAGCCGAGTTTCAACGGGCGGCAAACAATCATCCGATTGGATGACGGCGTACATTTGATCAAACT
GAATGGAAGCAAGGATGAGGTCGCCGCTTTTGTCAATTTAAATGGAAACAACACCGGCAAAAACGACACTTTCGGCATTG
TTAAGGAAGCGAACGTCAATCTTGAAGCTGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGGGTCCCGATAAT
GACAATAAATTTAAATCAATTAACCAAAAACCAGAAAAATACAGCCAAAGATACCGCATCCGCGACAACAACGGCAATCG
CGATTTGGGCGACATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTATCTGGCAACTTCTGCCAACGACGGGATGGTGC
ATATCTTCAAAAAAACCGGCACAGACCAACGAGGCTACGAACTGAAGCTCAGCTACATCCCGGGTACGATGCCGCGCAAG
GATATTGAAAGCAACGATTCTACACTCGCCAAAGAGCTGCGCGCCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGG
CGTGGACGGCGGCTTTGTCTTGCGTCAAGTTGAAGACCGCGTGTTTATGTTCGGCGCGATGGGTTTGGGCGGCAGGGGCG
CGTATGCCTTGGATTTAAGCAAAACCAACGGCAATTATCCAGCCGCCGCTCCCCTGTTTGATGTCAAAGATGGCGATAAG
AAAGGCAAAAATCGCGTGGAAGTGGAATTAGGCTACACCGTCGGCACGCCGCAAATCGGCAAAACCCAAAACGGCACATA
CTCCGCCTTCCTCGCTTCCGGTTATGCGGCTAAACAAATTGACGACTCAACAAATAAAACCGCGCTGTATGTGTATGATT
TGAAAGACACCTTAGGTACGCCGATTGCAAAAATCGAAGTGAAGGACGGCAAGGGCGGGCTTTCGTCCCCCACGCTGGTG
GATAAAGATTTGGACGGCATTGTCGATATCGCCTATGCCGGCGACCGGGGCGGCAATATGTACCGCTTTGATTTGAGCGG
CGACAATCCGTCCAAATGGACTGTACGCACTATTTTCCAAGGCACAAAACCGATTACCTCCGCGCCCGCCGTTTCCCGAC
TGGCAGACAAACGCGTGGTCATCTTCGGTACGGGCAGCGATTTGAGTGAACAGGATGTAGTCGATAAGGATCAACAATAT
ATTTACGGTATCTTTGACGACGATAAGGGGACGGTTAAGGTAACGGTACAAAACGGCACGGGAGGCGGGCTGCTCGAGCA
AGTGCTTAAAGAGGAAAATAAAACATTATTCCTGAACAAGGGATCCGACGGATCGGGCAGTAAGGGGTGGGTAGTGAAGC
TGAAGGAAGGACAGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTCGTAACCATCCGCAAGTATAAAGAC
GACGGCTGCGGCGCGGATACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCC
GATTGTGCCGGAAGCCAATAAGGATGTCGCACAATATTCCGGCCATAAGACATCCTCCAAAGGCAAATCCATCCCTATAG
GTTGTATGGAAAAAGACGGTAAAACCGTCTGCCCGAACGGATATGTTTACGACAAGCCGGTTAATGTGCGTTATCTGGAC
GAAAAGAAAACAGACGATTTCCCCGTCACGGCAGACGGTGATGCAGGCGGCAGCGGAACATTCAAAGAGGGTAAAAAACC
CGCCCGCAATAACCGGTGCTTCTCCGGAAAAGGTGTGCGCACCCTGCTGATGAACGATTTGGACAGCTTGGATATTACCG
GCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (509-838)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	72.217	100	0.738