Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   BSM4216_RS04580 Genome accession   NZ_CP012024
Coordinates   967979..968638 (+) Length   219 a.a.
NCBI ID   WP_003353659.1    Uniprot ID   G9QK25
Organism   Bacillus smithii strain DSM 4216     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 962979..973638
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSM4216_RS04555 (BSM4216_1106) phoU 963076..963732 (+) 657 WP_003353664.1 phosphate signaling complex protein PhoU -
  BSM4216_RS04560 (BSM4216_1109) - 964652..965224 (+) 573 WP_048622888.1 DeoR family transcriptional regulator -
  BSM4216_RS04565 (BSM4216_1110) - 965253..966902 (+) 1650 WP_048622889.1 copper resistance CopC/CopD family protein -
  BSM4216_RS04570 (BSM4216_1111) - 966918..967583 (+) 666 WP_048622890.1 DUF1775 domain-containing protein -
  BSM4216_RS04580 (BSM4216_1113) mecA 967979..968638 (+) 660 WP_003353659.1 adaptor protein MecA Regulator
  BSM4216_RS04585 (BSM4216_1114) - 968763..969965 (+) 1203 WP_048622892.1 competence protein CoiA family protein -
  BSM4216_RS04590 (BSM4216_1115) pepF 970078..971895 (+) 1818 WP_003353656.1 oligoendopeptidase F Regulator
  BSM4216_RS16865 (BSM4216_1116) - 972047..972223 (-) 177 WP_003353655.1 hypothetical protein -

Sequence


Protein


Download         Length: 219 a.a.        Molecular weight: 26259.27 Da        Isoelectric Point: 3.9038

>NTDB_id=150499 BSM4216_RS04580 WP_003353659.1 967979..968638(+) (mecA) [Bacillus smithii strain DSM 4216]
MDIERINENTVKFYISYVDIEERGFDREEIWYNRERSEELFWEVMDEVHEEEDFAVEGPLWIQVQALEKGLEILVTKAQI
SKDGQRLELPIPEEKLREFPMDERFEELLDQHFHIRPLDGDEEDSLEFLLVFNDFEDLIGLAAQPGLDNLQTKLFAYDDK
YYVYVEFPEELFTEEDIDNYLSILLEFGKETNTTIHVLEEYGKVIIENDVFRTLQKYFS

Nucleotide


Download         Length: 660 bp        

>NTDB_id=150499 BSM4216_RS04580 WP_003353659.1 967979..968638(+) (mecA) [Bacillus smithii strain DSM 4216]
ATGGACATAGAACGTATAAATGAAAATACAGTCAAGTTTTACATTTCGTATGTTGATATAGAAGAAAGAGGTTTTGACCG
CGAAGAAATCTGGTATAACCGGGAACGCAGTGAAGAACTCTTTTGGGAAGTAATGGATGAAGTGCATGAGGAAGAAGATT
TCGCTGTGGAAGGTCCGCTCTGGATCCAAGTGCAAGCTTTGGAAAAAGGGCTTGAAATCTTAGTGACGAAAGCGCAAATC
TCCAAAGACGGTCAACGTTTAGAATTGCCCATTCCAGAAGAGAAACTGCGAGAATTCCCGATGGATGAGCGTTTTGAAGA
GCTTTTAGACCAGCATTTCCACATTCGACCGTTAGACGGTGATGAAGAAGATTCTTTAGAATTTTTGCTGGTATTTAATG
ATTTTGAAGACTTGATCGGACTTGCTGCCCAGCCAGGTCTGGACAATTTGCAAACAAAGCTTTTTGCCTATGACGATAAA
TATTATGTATATGTCGAATTTCCTGAGGAATTGTTTACGGAAGAAGATATCGATAATTATTTAAGCATTTTGCTTGAATT
TGGGAAAGAAACCAATACGACGATCCATGTTCTGGAGGAATACGGAAAAGTCATTATAGAAAACGATGTATTCCGTACAC
TGCAAAAGTATTTCTCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G9QK25

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

59.729

100

0.603


Multiple sequence alignment