Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | AXW93_RS02120 | Genome accession | NZ_CP014866 |
| Coordinates | 438187..438552 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain PA_154197 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 433187..443552
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AXW93_RS02090 (AXW93_02020) | pyrR | 433809..434321 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| AXW93_RS02095 (AXW93_02025) | ruvX | 434433..434867 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| AXW93_RS02100 (AXW93_02030) | - | 434867..435436 (-) | 570 | WP_003100947.1 | YqgE/AlgH family protein | - |
| AXW93_RS02105 (AXW93_02035) | - | 435485..436378 (-) | 894 | WP_003162015.1 | energy transducer TonB | - |
| AXW93_RS02110 (AXW93_02040) | gshB | 436525..437478 (-) | 954 | WP_080911334.1 | glutathione synthase | - |
| AXW93_RS02115 (AXW93_02045) | pilG | 437733..438140 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| AXW93_RS02120 (AXW93_02050) | pilH | 438187..438552 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| AXW93_RS02125 (AXW93_02055) | - | 438603..439139 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| AXW93_RS02130 (AXW93_02060) | pilJ | 439224..441272 (+) | 2049 | WP_003100940.1 | chemotaxis chemoreceptor PilJ | - |
| AXW93_RS02135 (AXW93_02065) | pilK | 441333..442208 (+) | 876 | WP_080911335.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=150418 AXW93_RS02120 WP_003084587.1 438187..438552(+) (pilH) [Pseudomonas aeruginosa strain PA_154197]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=150418 AXW93_RS02120 WP_003084587.1 438187..438552(+) (pilH) [Pseudomonas aeruginosa strain PA_154197]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |