Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SAHC1335_RS11830 | Genome accession | NZ_CP012012 |
| Coordinates | 2297530..2297925 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain HC1335 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2292530..2302925
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAHC1335_RS11805 (SAHC1335_00033) | thiE | 2293130..2293771 (-) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
| SAHC1335_RS11810 (SAHC1335_00034) | thiM | 2293773..2294564 (-) | 792 | WP_001108479.1 | hydroxyethylthiazole kinase | - |
| SAHC1335_RS11815 (SAHC1335_00035) | thiD | 2294548..2295378 (-) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| SAHC1335_RS11820 (SAHC1335_00036) | tenA | 2295371..2296060 (-) | 690 | WP_000396077.1 | thiaminase II | - |
| SAHC1335_RS11825 (SAHC1335_00037) | sceD | 2296446..2297141 (-) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| SAHC1335_RS11830 (SAHC1335_00038) | ssb | 2297530..2297925 (-) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| SAHC1335_RS11835 (SAHC1335_00039) | - | 2298119..2298559 (+) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| SAHC1335_RS11840 (SAHC1335_00040) | fabZ | 2298618..2299058 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| SAHC1335_RS11845 (SAHC1335_00041) | murA | 2299092..2300357 (-) | 1266 | WP_000358000.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| SAHC1335_RS11850 (SAHC1335_00043) | - | 2300468..2300701 (-) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| SAHC1335_RS11855 | - | 2300833..2300925 (-) | 93 | WP_001790611.1 | hypothetical protein | - |
| SAHC1335_RS11860 (SAHC1335_00045) | - | 2301263..2301667 (-) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=150240 SAHC1335_RS11830 WP_000932694.1 2297530..2297925(-) (ssb) [Staphylococcus aureus strain HC1335]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=150240 SAHC1335_RS11830 WP_000932694.1 2297530..2297925(-) (ssb) [Staphylococcus aureus strain HC1335]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |