Detailed information NTG0150150

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: BaDB11_RS04690
• Genome accession: NZ_CP014795
• Coordinates: 836017..838404 (-)
• Length: 795 a.a.
• NCBI ID: WP_075218365.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain SCK B11
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 831017..843404

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BaDB11_RS04660 (BaDB11_00944)	-	831286..831609 (-)	324	WP_003183676.1	YqxA family protein	-
BaDB11_RS04665 (BaDB11_00945)	spoIIP	831625..832830 (-)	1206	WP_075218364.1	stage II sporulation protein P	-
BaDB11_RS04670 (BaDB11_00946)	gpr	832949..834055 (-)	1107	WP_009327867.1	GPR endopeptidase	-
BaDB11_RS04675 (BaDB11_00947)	rpsT	834260..834526 (+)	267	WP_003183682.1	30S ribosomal protein S20	-
BaDB11_RS04680 (BaDB11_00948)	holA	834588..835631 (-)	1044	WP_025804972.1	DNA polymerase III subunit delta	-
BaDB11_RS04685 (BaDB11_00949)	-	835861..835992 (+)	132	WP_003183686.1	YqzM family protein	-
BaDB11_RS04690 (BaDB11_00950)	comEC	836017..838404 (-)	2388	WP_075218365.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
BaDB11_RS04695 (BaDB11_00951)	-	838408..838977 (-)	570	WP_003183690.1	ComE operon protein 2	-
BaDB11_RS04700 (BaDB11_00952)	comEA	839046..839675 (-)	630	WP_003183693.1	helix-hairpin-helix domain-containing protein	Machinery gene
BaDB11_RS04705 (BaDB11_00953)	comER	839759..840580 (+)	822	WP_009327864.1	late competence protein ComER	-
BaDB11_RS04710 (BaDB11_00954)	-	840650..841405 (-)	756	WP_011198132.1	class I SAM-dependent DNA methyltransferase	-
BaDB11_RS04715 (BaDB11_00955)	rsfS	841402..841758 (-)	357	WP_003183699.1	ribosome silencing factor	-
BaDB11_RS04720 (BaDB11_00956)	yqeK	841772..842335 (-)	564	WP_003183701.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
BaDB11_RS04725 (BaDB11_00957)	-	842325..842894 (-)	570	WP_003183702.1	nicotinate-nucleotide adenylyltransferase	-
BaDB11_RS04730 (BaDB11_00958)	yhbY	842913..843203 (-)	291	WP_003183704.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 795 a.a.
• Molecular weight: 87843.82 Da
• Isoelectric Point: 8.3336

>NTDB_id=150150 BaDB11_RS04690 WP_075218365.1 836017..838404(-) (comEC) [Bacillus licheniformis strain SCK B11]
MDRHRIFPCGAISAAAGIASAHSSLYLFLAVGFFLFFILCFFKKQILLFALCAAVCILYFTSFYVIDHFNTTIYHEGKFH
TLASVQDIPVIDGDRLSFTAETDEGEALKAGYTLRSPQEKRALSALQPGSLCVMQGELKEPKKETVPGTFNQKESMYQKG
IHWIFAVQSITSCKPGGGLMPSLLKIRKAGLDFIEENMADSAAGIGRALIFGDRFLIEQDVLDGYQRLGIIHLLAISGLH
VGLLSAALFYIFIRFGVTRECAKWLLVIGLPVAAVLTGGAPSVMRAVFMSEIYLLASLSKKNFKSADVISIACLGLLLYH
PYLLFQAGFQLSFAVSFVFILSKEILTRPKSRISQLLLGSFLAQLASLPILLFHFQEFSFLSTLMNLFFIPLYIFIIMPL
SFGSLLAFICFHPLGEAAAAVLDRLLVWSHQAVKTVSAADVSVFSAAKPPDLLLFFYFTAIFLFLLLLEKEMSLRAVMIP
SGLLAAVFVIHACLPQLAGEGEVTMLDIGQGDSMYVSAPGQNGTVFIDTGGTVSFRKERWRKRKKDFSLGESVLMPFLAT
KGVKKLDALILTHADQDHIGEAHVLIQKHKVKQLIVPKGFAAEPSDEKLLRLALKEGVEVNVAKRGDILHIGNLEFYVLS
PKEADKNSKNNGSLVLWMKAGGFSWLLTGDLEKEGEKEMMEVYPNLKADILKVGHHGSKGSTGEELIKQIEPKTALISVG
EHNRYGHPHGEVLDILNRHDVKVFRTDRHGSIQHLFRGGNGTFLLHPPYDKVHSPQEKMTAEKQQSSKSRLPDGE

Nucleotide

• Length: 2388 bp

>NTDB_id=150150 BaDB11_RS04690 WP_075218365.1 836017..838404(-) (comEC) [Bacillus licheniformis strain SCK B11]
ATGGACAGACATCGCATCTTCCCGTGCGGAGCGATTTCAGCGGCAGCCGGAATCGCCTCCGCTCACTCTTCTCTTTATCT
CTTCCTCGCCGTCGGTTTTTTTCTGTTCTTTATCCTCTGTTTCTTCAAAAAACAAATACTCCTTTTCGCTTTATGTGCAG
CGGTTTGTATTTTATATTTTACTTCTTTTTACGTGATCGACCATTTCAATACAACGATTTATCATGAAGGCAAATTTCAC
ACGCTCGCTTCTGTTCAGGATATTCCCGTAATAGACGGAGACCGGCTTTCTTTCACAGCCGAAACAGATGAGGGAGAAGC
TTTGAAAGCGGGATATACGCTCCGGTCTCCACAAGAAAAACGGGCGCTCTCAGCTCTTCAGCCGGGCAGCCTCTGTGTCA
TGCAAGGTGAATTAAAAGAGCCGAAAAAAGAGACGGTTCCTGGCACTTTTAATCAAAAAGAATCCATGTATCAAAAAGGG
ATTCACTGGATTTTTGCAGTTCAGTCTATTACAAGCTGCAAGCCGGGCGGCGGCCTGATGCCATCTCTATTGAAAATCAG
AAAAGCGGGCCTTGATTTTATAGAGGAAAATATGGCGGACTCGGCTGCCGGTATTGGAAGAGCGCTAATTTTCGGAGACC
GGTTTCTCATTGAACAAGATGTCCTGGACGGCTATCAGCGTCTTGGAATCATTCACCTTTTAGCGATTTCCGGGCTTCAT
GTCGGTCTGCTCTCAGCCGCTCTGTTTTACATATTTATTCGCTTCGGCGTCACGAGGGAATGCGCAAAATGGCTGCTCGT
GATCGGCCTTCCCGTTGCCGCAGTTTTGACCGGAGGCGCCCCGTCGGTGATGAGAGCGGTTTTCATGTCTGAAATCTATC
TGCTGGCATCACTGTCTAAAAAGAACTTCAAAAGTGCCGATGTGATCAGCATTGCCTGCCTCGGACTGCTGCTGTATCAT
CCTTATCTGTTATTTCAAGCCGGATTCCAGCTTTCTTTTGCTGTATCCTTCGTTTTCATTCTTTCAAAGGAGATATTGAC
CAGGCCGAAAAGCCGAATCTCTCAGCTGCTATTGGGGTCATTTTTGGCTCAGCTCGCTTCCCTCCCGATTCTGCTTTTTC
ATTTTCAAGAGTTTTCATTTCTCAGCACATTAATGAATCTATTTTTTATACCTCTTTATATTTTCATCATCATGCCGCTG
TCTTTCGGAAGCCTGCTTGCTTTCATATGTTTTCATCCCTTGGGGGAGGCGGCAGCCGCCGTTCTTGACCGTCTGCTTGT
GTGGAGCCATCAGGCTGTTAAAACGGTGTCTGCCGCGGATGTTTCGGTCTTTTCTGCGGCTAAGCCGCCGGATCTTTTGT
TGTTTTTCTACTTCACAGCCATTTTTCTGTTTTTGCTGTTGCTGGAAAAAGAGATGTCGCTTCGTGCGGTCATGATTCCG
TCCGGCCTGCTTGCTGCTGTGTTTGTGATTCACGCATGTCTTCCTCAGCTTGCAGGTGAGGGAGAGGTTACAATGCTTGA
TATCGGCCAAGGGGACAGCATGTATGTCAGCGCTCCCGGTCAGAATGGCACGGTCTTCATTGATACGGGAGGAACCGTAT
CCTTCCGGAAAGAGCGGTGGAGAAAGCGGAAGAAGGATTTTTCATTGGGGGAGAGCGTGTTAATGCCTTTTCTGGCAACC
AAAGGGGTCAAGAAGCTCGATGCTTTAATTTTGACCCATGCTGATCAGGATCATATCGGTGAAGCGCATGTGCTGATCCA
AAAACATAAAGTGAAGCAATTGATCGTGCCGAAAGGCTTCGCAGCCGAACCGTCTGATGAAAAGCTGCTTCGCCTTGCCT
TGAAGGAAGGCGTCGAGGTGAATGTAGCCAAAAGAGGTGACATCCTTCATATTGGCAATCTTGAATTTTATGTTCTTTCA
CCGAAAGAGGCGGACAAAAACAGCAAAAACAATGGTTCCCTCGTATTGTGGATGAAAGCAGGCGGATTTTCGTGGCTGTT
AACTGGCGATTTGGAGAAGGAGGGCGAAAAGGAGATGATGGAAGTGTATCCGAATCTTAAAGCGGATATTCTGAAAGTCG
GTCACCATGGAAGCAAAGGTTCGACGGGTGAAGAGCTGATCAAGCAAATTGAGCCGAAAACCGCCCTCATTTCGGTGGGG
GAGCACAACCGCTACGGGCATCCCCACGGGGAAGTGCTGGACATCCTAAACCGCCACGATGTGAAGGTATTCAGAACGGA
TCGGCACGGTTCGATTCAGCACCTATTTCGAGGCGGGAACGGAACGTTTTTGCTACATCCTCCATATGATAAAGTACATT
CCCCGCAAGAAAAAATGACTGCTGAAAAACAGCAGTCGTCAAAAAGCCGCTTGCCTGACGGAGAGTAA

Domains

Predicted by InterProScan.

• Competence protein (Competence) (209-470)

• Domain of unknown function (DUF4131) (DUF4131) (24-171)

• Metallo-beta-lactamase superfamily (Lactamase_B) (509-720)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	48.105	96.226	0.463