Detailed information NTG0150124

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BaDB11_RS00055
• Genome accession: NZ_CP014795
• Coordinates: 8522..9628 (+)
• Length: 368 a.a.
• NCBI ID: WP_009328417.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain SCK B11
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3522..14628

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BaDB11_RS00030 (BaDB11_00006)	-	4898..5320 (+)	423	WP_009328422.1	SMI1/KNR4 family protein	-
BaDB11_RS00035 (BaDB11_00007)	-	5361..5819 (+)	459	WP_009328421.1	SMI1/KNR4 family protein	-
BaDB11_RS00040 (BaDB11_00008)	rok	6105..6587 (+)	483	WP_009328420.1	hypothetical protein	Regulator
BaDB11_RS00045 (BaDB11_00009)	-	6657..7010 (+)	354	WP_009328419.1	hypothetical protein	-
BaDB11_RS00050 (BaDB11_00010)	-	7152..8411 (+)	1260	WP_009328418.1	MFS transporter	-
BaDB11_RS00055 (BaDB11_00011)	rapC	8522..9628 (+)	1107	WP_009328417.1	tetratricopeptide repeat protein	Regulator
BaDB11_RS23070 (BaDB11_00012)	-	9625..9753 (+)	129	WP_256692922.1	hypothetical protein	-
BaDB11_RS23160	-	10156..10239 (-)	84	WP_034291561.1	putative holin-like toxin	-
BaDB11_RS00065 (BaDB11_00013)	-	10441..10740 (-)	300	WP_034291560.1	hypothetical protein	-
BaDB11_RS00070 (BaDB11_00014)	-	10759..11013 (-)	255	WP_009328416.1	phage holin	-
BaDB11_RS00075 (BaDB11_00015)	-	11032..11418 (-)	387	WP_021837858.1	hypothetical protein	-
BaDB11_RS00080 (BaDB11_00016)	-	11550..12638 (-)	1089	WP_009328414.1	N-acetylmuramoyl-L-alanine amidase	-
BaDB11_RS22360 (BaDB11_00017)	-	12789..12947 (-)	159	WP_009328413.1	hypothetical protein	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 43739.88 Da
• Isoelectric Point: 5.0023

>NTDB_id=150124 BaDB11_RS00055 WP_009328417.1 8522..9628(+) (rapC) [Bacillus licheniformis strain SCK B11]
MTTTEIAYEEVANKINQWYTMIKKREIEDAIKLKDEIDCLLDDMEENQNLLLYYNLLDARHKMSVDMFKSSGEILEKIRK
SPEMQKTDDMLQYYFLFFSGQYMFFKKKYIDAINYYKLAEDKLVKIEDEIEKAEFYYHLAISYYYIDQYFFSLAYAEKAL
TIFREFEDYAHRSISSEMILGANKLDLFHYESAYEHYSHALKFAKAKQIPESEGKAYHNLGILYIRRNMLSEAKDCFKNA
LQLQDYIQSINGLKSIYNLTHVLYKSGQIEEAREWYDKGLKRAEKEGDKEYLAKLTLVNTLYDEYNESVLTNSLDILEKL
DLWNDVAELTLEVGCYYKKSDDIKNAAKYLEKCIHARDQILKVTEELK

Nucleotide

• Length: 1107 bp

>NTDB_id=150124 BaDB11_RS00055 WP_009328417.1 8522..9628(+) (rapC) [Bacillus licheniformis strain SCK B11]
TTGACAACGACTGAAATTGCATATGAAGAAGTAGCCAATAAGATTAACCAGTGGTATACGATGATTAAAAAGCGTGAAAT
TGAAGATGCCATAAAGTTGAAAGATGAAATTGATTGCTTGTTGGATGATATGGAGGAGAATCAAAATTTGCTCCTTTATT
ACAATCTCTTAGATGCGCGTCACAAGATGTCGGTAGACATGTTTAAGTCGTCAGGGGAAATCCTTGAGAAGATTCGGAAA
AGTCCTGAAATGCAGAAAACGGATGATATGCTCCAATATTATTTTTTGTTTTTCTCTGGTCAATATATGTTTTTCAAAAA
GAAGTACATAGATGCAATTAATTATTACAAATTAGCTGAAGATAAGCTGGTTAAAATTGAAGATGAAATTGAAAAAGCGG
AATTTTATTATCATTTAGCCATATCATATTATTACATTGATCAATATTTCTTCTCATTAGCTTATGCTGAAAAAGCTCTA
ACTATCTTCAGGGAATTTGAAGACTATGCACATAGATCAATTAGCAGTGAAATGATCTTGGGTGCAAATAAACTTGATTT
ATTCCATTATGAATCGGCTTATGAGCATTACAGCCATGCCTTAAAATTTGCAAAGGCTAAGCAGATTCCTGAGTCTGAAG
GAAAGGCATATCATAATCTTGGGATACTCTATATAAGAAGAAACATGCTATCTGAAGCAAAAGACTGTTTTAAAAATGCT
TTGCAGCTTCAAGATTATATCCAAAGCATAAATGGACTTAAATCAATCTATAACCTTACTCATGTCTTGTATAAATCGGG
ACAGATTGAAGAAGCAAGGGAATGGTATGACAAAGGATTGAAACGTGCAGAAAAAGAAGGAGATAAGGAATATTTGGCGA
AACTTACACTTGTTAACACCTTATACGATGAGTACAATGAAAGTGTGTTAACGAATTCCCTTGACATTTTAGAAAAGTTG
GATTTATGGAATGATGTAGCAGAATTGACACTAGAAGTGGGGTGCTACTACAAAAAATCCGATGATATCAAGAATGCAGC
AAAATATCTTGAAAAATGTATTCACGCAAGGGATCAAATTCTAAAAGTGACGGAGGAATTAAAATGA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_8) (333-354)

• MalT-like TPR region (TPR_MalT) (153-285)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	35.544	100	0.364