Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | ACX60_RS01640 | Genome accession | NZ_CP012004 |
| Coordinates | 345956..346429 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214058.1 | Uniprot ID | A0A1E3M9I3 |
| Organism | Acinetobacter baumannii strain ATCC 17978-mff | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 340956..351429
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACX60_RS01620 (ACX60_01620) | - | 341419..343524 (-) | 2106 | WP_001117590.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
| ACX60_RS19420 | - | 343564..343694 (-) | 131 | Protein_310 | hypothetical protein | - |
| ACX60_RS01625 (ACX60_01625) | rpoZ | 343733..344011 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ACX60_RS01630 (ACX60_01630) | gmk | 344084..344713 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| ACX60_RS01635 (ACX60_01635) | ispH | 344836..345786 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ACX60_RS01640 (ACX60_01640) | fimU | 345956..346429 (+) | 474 | WP_001214058.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| ACX60_RS01645 (ACX60_01645) | pilV | 346423..346983 (+) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| ACX60_RS01650 (ACX60_01650) | pilW | 346984..347985 (+) | 1002 | WP_000079196.1 | PilW family protein | Machinery gene |
| ACX60_RS01655 (ACX60_01655) | pilX | 347982..348800 (+) | 819 | WP_000149378.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16823.45 Da Isoelectric Point: 9.3085
>NTDB_id=150051 ACX60_RS01640 WP_001214058.1 345956..346429(+) (fimU) [Acinetobacter baumannii strain ATCC 17978-mff]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPS
SLNWKTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPS
SLNWKTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=150051 ACX60_RS01640 WP_001214058.1 345956..346429(+) (fimU) [Acinetobacter baumannii strain ATCC 17978-mff]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGCCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCTCT
TCATTAAATTGGAAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGCCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCTCT
TCATTAAATTGGAAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
98.726 |
100 |
0.987 |