Detailed information NTG0149779

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACG33_RS13895
• Genome accession: NZ_CP011971
• Coordinates: 3085125..3086123 (+)
• Length: 332 a.a.
• NCBI ID: WP_066922060.1
• Uniprot ID: A0A127FE62
• Organism: Steroidobacter denitrificans strain DSM 18526
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3080125..3091123

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG33_RS13865 (ACG33_13865)	rpmB	3080553..3080789 (+)	237	WP_066922051.1	50S ribosomal protein L28	-
ACG33_RS13870 (ACG33_13870)	rpmG	3080827..3080982 (+)	156	WP_066922054.1	50S ribosomal protein L33	-
ACG33_RS13875 (ACG33_13875)	mutM	3081056..3081871 (+)	816	WP_066922056.1	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	-
ACG33_RS13880 (ACG33_13880)	ggt	3081908..3083587 (-)	1680	WP_083537291.1	gamma-glutamyltransferase	-
ACG33_RS13885 (ACG33_13890)	coaD	3083731..3084225 (-)	495	WP_066922058.1	pantetheine-phosphate adenylyltransferase	-
ACG33_RS13890 (ACG33_13895)	rsmD	3084222..3084932 (-)	711	WP_083537293.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACG33_RS13895 (ACG33_13900)	pilA	3085125..3086123 (+)	999	WP_066922060.1	signal recognition particle-docking protein FtsY	Machinery gene
ACG33_RS13900 (ACG33_13905)	ftsE	3086127..3086774 (+)	648	Protein_2759	cell division ATP-binding protein FtsE	-
ACG33_RS13905 (ACG33_13910)	ftsX	3086960..3087874 (+)	915	WP_066922061.1	permease-like cell division protein FtsX	-
ACG33_RS13910 (ACG33_13915)	rpoH	3088109..3088993 (+)	885	WP_066922063.1	RNA polymerase sigma factor RpoH	-
ACG33_RS13915 (ACG33_13920)	-	3089099..3089737 (-)	639	WP_066922066.1	OmpA family protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 35547.96 Da
• Isoelectric Point: 6.9985

>NTDB_id=149779 ACG33_RS13895 WP_066922060.1 3085125..3086123(+) (pilA) [Steroidobacter denitrificans strain DSM 18526]
MLGFFKKSKSDSTPSKSPPHPQTAVSRPGLFKRLREKLNRGDSWLTYDLANLLPGGRIDETVLEELEMRLITADVGVETT
EKILADLRGKVARQELGDLDALIAALRTSLLDILQPRARPLKIDADLAPFAILVVGVNGAGKTTTIGKLAHHFKAQGMKV
ILAAGDTFRAAAVEQLQAWGRRNDVTVIAQSTGADPAAVAFDAMQAAQARGFDVLLADTAGRLHTQSNLMDELRKVKRVM
GRIDAGAPHEILLVLDASQGQNALQQARLFNAALGVTGIVLTKLDGTAKGGIVFAIASELDIPIRYIGIGEAAEDFAEFD
APAFVDAVLKKD

Nucleotide

• Length: 999 bp

>NTDB_id=149779 ACG33_RS13895 WP_066922060.1 3085125..3086123(+) (pilA) [Steroidobacter denitrificans strain DSM 18526]
ATGCTCGGCTTCTTCAAAAAATCCAAATCTGACTCCACTCCCTCGAAGTCCCCTCCCCACCCGCAAACGGCGGTGAGCAG
ACCGGGCTTGTTCAAGCGTCTACGCGAAAAACTCAATCGCGGCGATTCCTGGCTGACCTACGATCTAGCGAACCTGCTGC
CCGGCGGACGCATCGATGAAACCGTGCTCGAGGAGCTGGAAATGCGGCTGATCACGGCCGATGTGGGTGTGGAAACGACC
GAAAAGATCCTTGCAGACCTGCGCGGCAAAGTGGCGCGCCAGGAACTCGGCGATCTCGATGCGCTCATCGCCGCCCTGCG
CACCAGCCTGCTGGACATACTCCAGCCTCGCGCCCGGCCGCTGAAAATCGACGCCGACCTCGCACCATTTGCGATTCTGG
TCGTGGGCGTCAACGGCGCCGGCAAAACCACTACGATCGGCAAACTCGCCCATCATTTCAAGGCGCAAGGCATGAAGGTC
ATACTGGCCGCGGGTGACACCTTTCGCGCCGCCGCGGTGGAACAGTTGCAGGCCTGGGGTCGGCGCAACGATGTGACGGT
GATCGCGCAAAGCACCGGTGCCGATCCGGCGGCAGTCGCCTTCGATGCCATGCAGGCCGCCCAGGCCCGCGGTTTCGACG
TATTGCTGGCCGACACGGCCGGCCGTCTGCATACCCAGTCCAACCTGATGGACGAATTGCGCAAGGTGAAGCGTGTAATG
GGCCGCATCGATGCCGGCGCTCCCCATGAAATCCTGCTGGTACTCGACGCCAGCCAGGGACAGAACGCTCTGCAGCAGGC
ACGCCTGTTCAATGCAGCCCTGGGCGTCACCGGCATCGTGCTCACCAAACTCGACGGCACCGCAAAAGGCGGCATCGTCT
TCGCGATCGCCAGCGAGTTGGACATTCCGATCCGCTATATCGGTATCGGCGAGGCCGCCGAGGATTTCGCGGAATTCGAT
GCGCCGGCCTTCGTCGATGCGGTACTCAAGAAGGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (130-329)

• SRP54-type protein, helical bundle domain (SRP54_N) (51-110)

3D structure

• AlphaFold DB: A0A127FE62

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	55.814	90.663	0.506