Detailed information NTG0149677

Bioinformatically predicted

Overview

• Name: recP/tkt
• Type: Machinery gene
• Locus tag: A1R12_RS08820
• Genome accession: NZ_CP014783
• Coordinates: 1839313..1841316 (+)
• Length: 667 a.a.
• NCBI ID: WP_007611727.1
• Uniprot ID: A7Z556
• Organism: Bacillus amyloliquefaciens strain B15
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1834313..1846316

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A1R12_RS20265	-	1834725..1834874 (+)	150	WP_007410334.1	hypothetical protein	-
A1R12_RS08785 (A1R12_08785)	-	1834861..1835691 (+)	831	WP_007410333.1	prohibitin family protein	-
A1R12_RS08790 (A1R12_08790)	-	1835719..1836168 (-)	450	WP_003154009.1	YndM family protein	-
A1R12_RS08795 (A1R12_08795)	-	1836322..1836750 (+)	429	WP_015417546.1	hypothetical protein	-
A1R12_RS08800 (A1R12_08800)	dinR/lexA	1837090..1837710 (-)	621	WP_003154004.1	transcriptional repressor LexA	Regulator
A1R12_RS08805 (A1R12_08805)	yneA	1837867..1838178 (+)	312	WP_003154001.1	cell division suppressor protein YneA	-
A1R12_RS08810 (A1R12_08810)	-	1838194..1838844 (+)	651	WP_015417547.1	recombinase family protein	-
A1R12_RS08815 (A1R12_08815)	-	1838913..1839146 (+)	234	WP_003153997.1	DUF896 domain-containing protein	-
A1R12_RS08820 (A1R12_08820)	recP/tkt	1839313..1841316 (+)	2004	WP_007611727.1	transketolase	Machinery gene
A1R12_RS08825 (A1R12_08825)	sirA	1841468..1841914 (+)	447	WP_003153995.1	sporulation inhibitor of replication protein SirA	-
A1R12_RS08830 (A1R12_08830)	-	1842000..1842218 (+)	219	WP_003153994.1	YneF family protein	-
A1R12_RS08835 (A1R12_08835)	-	1842292..1842465 (-)	174	WP_012117647.1	aspartyl-phosphate phosphatase Spo0E family protein	-
A1R12_RS08840 (A1R12_08840)	-	1842667..1843374 (+)	708	WP_088056486.1	cytochrome c biogenesis protein CcdA	-
A1R12_RS08845 (A1R12_08845)	-	1843459..1843821 (+)	363	WP_007410327.1	response regulator	-
A1R12_RS08850 (A1R12_08850)	-	1843901..1844392 (+)	492	WP_007611735.1	CcdC family protein	-
A1R12_RS08855 (A1R12_08855)	-	1844420..1844848 (-)	429	WP_060674236.1	DUF2621 domain-containing protein	-
A1R12_RS08860 (A1R12_08860)	-	1845082..1845453 (-)	372	WP_007410324.1	Hsp20/alpha crystallin family protein	-
A1R12_RS08865 (A1R12_08865)	-	1845547..1845693 (-)	147	WP_003153984.1	small acid-soluble spore protein P	-
A1R12_RS08870 (A1R12_08870)	sspO	1845723..1845869 (-)	147	WP_003153982.1	acid-soluble spore protein SspO	-

Sequence

Protein

• Length: 667 a.a.
• Molecular weight: 72541.75 Da
• Isoelectric Point: 4.9029

>NTDB_id=149677 A1R12_RS08820 WP_007611727.1 1839313..1841316(+) (recP/tkt) [Bacillus amyloliquefaciens strain B15]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVNPQNPGWFNRDRFVLSAGHGSMLLYSMLHLSG
YDLSIEDLKQFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLELGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIAELTAAIEKARQNDKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGLEESKLTKEAYAWTFEEDFYVPEEVYGHFNQAVKEAGSKKEQEWNELFAAYKE
KYPELAEQLSLGMKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGIAKKIPFFVGGSADLAGSNKTTIKNGGDFTAKDY
AGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLASLMGLPVTYVFTHDSIAVGEDGPTHEPIEQLA
SLRALPNLSVIRPADGNETAAAWKVAVQSQDHPTALVLTRQNLPTIDQQAEEAYAGVEKGAYIVSKAQTESPAALLLATG
SEVGLAIEAQAKLAEENIHVSVVSMPSWDRFEKQSAEYKNSVLPPNVTKRLAIEMGSSFGWGKFTGLEGDVLAIDRFGAS
APGETIMKEYGFTAENVVDRVKKLLNK

Nucleotide

• Length: 2004 bp

>NTDB_id=149677 A1R12_RS08820 WP_007611727.1 1839313..1841316(+) (recP/tkt) [Bacillus amyloliquefaciens strain B15]
ATGGATACAATTGAAAAGAAATCAGTTGCCACCATTCGTACACTATCTATAGACGCAATTGAAAAAGCGAATTCCGGACA
TCCGGGCATGCCGATGGGAGCCGCTCCGATGGCATATACGCTGTGGACGAAATTTATGAATGTAAACCCGCAGAATCCGG
GCTGGTTTAACCGCGACCGCTTTGTTTTATCAGCAGGCCACGGTTCAATGCTTTTATACAGCATGCTGCATTTAAGCGGA
TATGACCTCAGCATTGAAGACTTGAAACAGTTCCGTCAATGGGGAAGCAAAACACCGGGACATCCGGAGTTCGGGCACAC
AGCCGGAGTAGACGCAACGACCGGGCCGCTTGGACAGGGTATTGCAATGGCAGTGGGAATGGCAATTGCAGAACGCCATC
TGGCTGAGACATATAACCGTGATTCTTTCAACGTAGTTGATCATTATACATACAGTATTTGCGGAGACGGTGATTTAATG
GAAGGCATTTCTTCCGAAGCCGCTTCTCTTGCAGGCCATCTTGAATTAGGCCGCCTGATCGTATTATACGATTCTAATGA
CATTTCCTTAGACGGCGATTTAGACCGTTCTTTCTCTGAAAATGTAAAGCAGCGTTTTGAAGCAATGAACTGGGAAGTTC
TTTATGTTGAGGACGGAAACAACATCGCTGAATTGACGGCTGCAATTGAAAAAGCGCGCCAGAATGATAAAAAACCGACT
TTGATTGAAGTGAAAACCACGATCGGTTTCGGCTCTCCAAACCGTGCGGGCACATCCGGCGTTCACGGCGCTCCGTTAGG
ACTAGAAGAGAGCAAGCTGACAAAAGAAGCGTATGCTTGGACGTTTGAAGAAGATTTTTATGTTCCGGAAGAAGTATACG
GGCATTTCAATCAAGCTGTAAAAGAAGCCGGCTCGAAAAAAGAACAGGAATGGAATGAACTGTTCGCGGCTTATAAAGAA
AAATATCCTGAGCTTGCTGAACAGCTGTCACTCGGCATGAAAGGCGAGCTTCCTAAAGACTGGGATCAGGAAGTTCCCGT
TTATGAAAAAGGCAGCAGCCTTGCTTCCCGCGCATCTTCAGGTGAGGTGCTGAACGGGATCGCCAAGAAAATTCCTTTCT
TTGTCGGGGGATCTGCTGACCTTGCGGGTTCAAATAAAACGACAATCAAAAATGGAGGAGACTTCACGGCCAAAGACTAC
GCCGGGAAAAACTTCTGGTTCGGTGTCCGTGAATTTGCGATGGGCGCTGCATTAAACGGAATGGCGCTTCACGGCGGCCT
CCGCGTATTCGGCGGCACATTCTTTGTGTTCTCTGATTATTTAAGACCTGCCATTCGTCTGGCGTCATTGATGGGTCTTC
CCGTCACTTATGTATTCACGCATGACAGTATTGCCGTAGGAGAGGACGGGCCGACTCACGAACCGATTGAGCAGCTTGCT
TCTTTACGCGCACTTCCTAACCTTTCTGTGATCAGACCTGCTGACGGAAATGAAACCGCAGCTGCATGGAAGGTTGCCGT
TCAAAGCCAAGATCATCCGACAGCTCTTGTATTGACACGCCAAAACCTGCCGACGATTGATCAGCAGGCTGAAGAAGCGT
ATGCGGGCGTGGAAAAAGGGGCTTATATCGTTTCAAAAGCCCAAACGGAATCACCGGCCGCTCTTCTTTTAGCGACAGGT
TCTGAAGTCGGACTTGCGATCGAAGCTCAAGCGAAACTGGCTGAAGAAAACATTCACGTATCTGTAGTCAGCATGCCGAG
CTGGGACCGCTTTGAAAAACAATCGGCCGAGTACAAAAACAGCGTGCTTCCTCCGAATGTGACGAAACGTCTTGCGATCG
AAATGGGTTCAAGCTTCGGATGGGGCAAATTTACCGGTCTTGAAGGAGACGTTCTCGCAATTGACCGTTTCGGTGCTTCA
GCTCCGGGAGAAACAATTATGAAAGAATACGGGTTTACTGCAGAAAACGTGGTTGACCGCGTGAAAAAACTTTTAAACAA
ATAA

Domains

Predicted by InterProScan.

• Transketolase, thiamine diphosphate binding domain (Transketolase_N) (5-338)

• Transketolase, pyrimidine binding domain (Transket_pyr) (354-524)

• Transketolase, C-terminal domain (Transketolase_C) (549-657)

3D structure

• AlphaFold DB: A7Z556

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recP/tkt	Streptococcus pneumoniae TIGR4	56.061	98.951	0.555