Detailed information NTG0149460

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AAV34_RS17460
• Genome accession: NZ_CP011937
• Coordinates: 3533106..3534254 (-)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain CBMB205
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3528106..3539254

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAV34_RS17430 (AAV34_16995)	-	3528242..3529000 (-)	759	WP_007609404.1	ABC transporter ATP-binding protein	-
AAV34_RS17435 (AAV34_17000)	-	3528994..3529941 (-)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
AAV34_RS17440 (AAV34_17005)	ceuB	3529931..3530884 (-)	954	WP_032872883.1	ABC transporter permease	Machinery gene
AAV34_RS17445 (AAV34_17010)	-	3531298..3532662 (+)	1365	WP_007609394.1	aspartate kinase	-
AAV34_RS17450 (AAV34_17015)	-	3532742..3532852 (+)	111	WP_369878517.1	YjcZ family sporulation protein	-
AAV34_RS17455 (AAV34_17020)	phrC	3533003..3533122 (-)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
AAV34_RS17460 (AAV34_17025)	rapC	3533106..3534254 (-)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
AAV34_RS17465 (AAV34_17030)	-	3534407..3535840 (-)	1434	WP_161503657.1	sensor histidine kinase	-
AAV34_RS17470 (AAV34_17035)	-	3535827..3536510 (-)	684	WP_032872879.1	response regulator transcription factor	-
AAV34_RS17475 (AAV34_17040)	-	3536723..3538153 (+)	1431	WP_032872876.1	ABC transporter permease	-
AAV34_RS17480 (AAV34_17045)	-	3538168..3538851 (+)	684	WP_032872874.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=149460 AAV34_RS17460 WP_007410270.1 3533106..3534254(-) (rapC) [Bacillus velezensis strain CBMB205]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=149460 AAV34_RS17460 WP_007410270.1 3533106..3534254(-) (rapC) [Bacillus velezensis strain CBMB205]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTACCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAGGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGACACATATAACGTCCGGATTATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568