Detailed information NTG0149397

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: AAV34_RS01765
• Genome accession: NZ_CP011937
• Coordinates: 348219..349364 (-)
• Length: 381 a.a.
• NCBI ID: WP_074534220.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain CBMB205
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 343219..354364

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAV34_RS01745 (AAV34_01725)	-	343502..343935 (+)	434	Protein_347	hypothetical protein	-
AAV34_RS01750 (AAV34_01730)	-	343960..346032 (-)	2073	WP_032875881.1	transglycosylase domain-containing protein	-
AAV34_RS01755 (AAV34_01735)	speE	346232..347062 (+)	831	WP_003151052.1	spermidine synthase	-
AAV34_RS01760 (AAV34_01740)	speB	347121..347993 (+)	873	WP_032875884.1	agmatinase	-
AAV34_RS19490	-	348116..348235 (-)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
AAV34_RS01765 (AAV34_01745)	rapF	348219..349364 (-)	1146	WP_074534220.1	Rap family tetratricopeptide repeat protein	Regulator
AAV34_RS01775 (AAV34_01750)	-	349595..350950 (+)	1356	WP_032875887.1	YncE family protein	-
AAV34_RS01780 (AAV34_01755)	-	350990..352366 (+)	1377	WP_032875890.1	YncE family protein	-
AAV34_RS01785 (AAV34_01760)	-	352373..352885 (-)	513	Protein_355	bacteriocin biosynthesis protein AlbG	-
AAV34_RS01790 (AAV34_01765)	-	353039..353467 (+)	429	WP_032869448.1	DUF1934 domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45737.21 Da
• Isoelectric Point: 5.0614

>NTDB_id=149397 AAV34_RS01765 WP_074534220.1 348219..349364(-) (rapF) [Bacillus velezensis strain CBMB205]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDAEKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLKNIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLENKLMYADIEELALDVAKYYYTQEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=149397 AAV34_RS01765 WP_074534220.1 348219..349364(-) (rapF) [Bacillus velezensis strain CBMB205]
GTGGCGAGTGTTTTATCATCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGTCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGCAGAAAAATATAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGGACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAAAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTAGAATACTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAATAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACACAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAGGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

• Tetratricopeptide repeat (TPR_8) (265-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	54.211	99.738	0.541